Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00791-1
         (313 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical...    29   0.68 
Z75532-3|CAA99810.1|  660|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr...    26   6.4  
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr...    26   6.4  
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ...    26   6.4  
AC006714-7|AAK29718.3|  612|Caenorhabditis elegans Hypothetical ...    26   6.4  

>AL021487-10|CAA16357.2| 1592|Caenorhabditis elegans Hypothetical
           protein Y45F10B.10 protein.
          Length = 1592

 Score = 29.1 bits (62), Expect = 0.68
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 169 YHGSSSQL*HNAAGH*ISVVCLCSSGCAS 83
           YH +S QL     GH  +V CLCSS  +S
Sbjct: 896 YHIASEQLIGTFKGHTAAVTCLCSSNDSS 924


>Z75532-3|CAA99810.1|  660|Caenorhabditis elegans Hypothetical
           protein C54G10.3 protein.
          Length = 660

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 19/48 (39%), Positives = 27/48 (56%)
 Frame = +1

Query: 22  LLYLRIARREQKLKLSGNSGRKHSRCCTSILRKFSGRQHCVTVDCCCH 165
           LL L+I +  Q L ++G+SG   S    S+LR F+G  HC +    CH
Sbjct: 442 LLSLQIIQG-QTLLITGDSGCGKS----SLLRMFAGLWHCSSGKMDCH 484


>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 237 EKVRSWSDVENG*CLASPHGVGATMAAAVN 148
           E V SW+   N   L SPH VG + +   N
Sbjct: 581 ENVHSWNKFANVLYLESPHQVGYSYSTVAN 610


>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 237 EKVRSWSDVENG*CLASPHGVGATMAAAVN 148
           E V SW+   N   L SPH VG + +   N
Sbjct: 581 ENVHSWNKFANVLYLESPHQVGYSYSTVAN 610


>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
           protein Y16B4A.2 protein.
          Length = 2105

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -2

Query: 237 EKVRSWSDVENG*CLASPHGVGATMAAAVN 148
           E V SW+   N   L SPH VG + +   N
Sbjct: 581 ENVHSWNKFANVLYLESPHQVGYSYSTVAN 610


>AC006714-7|AAK29718.3|  612|Caenorhabditis elegans Hypothetical
          protein Y119D3B.11 protein.
          Length = 612

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 74 FPLSFNFCSLRAIRRYKSYYVD 9
          FP  F FCS+   RR+   +VD
Sbjct: 27 FPEDFEFCSMEQERRFFKNFVD 48


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,780,575
Number of Sequences: 27780
Number of extensions: 121705
Number of successful extensions: 282
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 282
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)