Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00788
         (621 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064964-1|AAH64964.1|  297|Homo sapiens TatD DNase domain conta...   136   6e-32
AF212250-1|AAK14933.1|  297|Homo sapiens CDA11 protein.               136   6e-32
AY071865-1|AAL61823.1|  250|Homo sapiens hepatocarcinoma high ex...    88   2e-17
BC117485-1|AAI17486.1|  274|Homo sapiens TatD DNase domain conta...    38   0.022
BC113638-1|AAI13639.1|  274|Homo sapiens TatD DNase domain conta...    38   0.022
BC048115-1|AAH48115.1|  275|Homo sapiens TATDN3 protein protein.       38   0.022

>BC064964-1|AAH64964.1|  297|Homo sapiens TatD DNase domain
           containing 1 protein.
          Length = 297

 Score =  136 bits (329), Expect = 6e-32
 Identities = 63/123 (51%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +3

Query: 261 KYIDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS 440
           K+IDIG NLTD M++G+Y G +KH+ DL  V+ RA   G+ K ++TGG+L+DSK A+ L+
Sbjct: 5   KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLA 64

Query: 441 RTDSKLFTTVGCHPSRA*GSIQS---DDYLQGLRDLISGNKDKVVAIGECGLDYERFHFC 611
           +T+   F+TVGCHP+R  G  +    D YL+ L +L   NK KVVAIGECGLD++R  FC
Sbjct: 65  QTNGMFFSTVGCHPTRC-GEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFC 123

Query: 612 EKE 620
            K+
Sbjct: 124 PKD 126


>AF212250-1|AAK14933.1|  297|Homo sapiens CDA11 protein.
          Length = 297

 Score =  136 bits (329), Expect = 6e-32
 Identities = 63/123 (51%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +3

Query: 261 KYIDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS 440
           K+IDIG NLTD M++G+Y G +KH+ DL  V+ RA   G+ K ++TGG+L+DSK A+ L+
Sbjct: 5   KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLA 64

Query: 441 RTDSKLFTTVGCHPSRA*GSIQS---DDYLQGLRDLISGNKDKVVAIGECGLDYERFHFC 611
           +T+   F+TVGCHP+R  G  +    D YL+ L +L   NK KVVAIGECGLD++R  FC
Sbjct: 65  QTNGMFFSTVGCHPTRC-GEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFC 123

Query: 612 EKE 620
            K+
Sbjct: 124 PKD 126


>AY071865-1|AAL61823.1|  250|Homo sapiens hepatocarcinoma high
           expression protein protein.
          Length = 250

 Score = 88.2 bits (209), Expect = 2e-17
 Identities = 40/80 (50%), Positives = 58/80 (72%), Gaps = 3/80 (3%)
 Frame = +3

Query: 390 IVTGGSLEDSKKAIELSRTDSKLFTTVGCHPSRA*GSIQSDD---YLQGLRDLISGNKDK 560
           ++TGG+L+DSK A+ L++T+   F+TVGCHP+R  G  + ++   YL+ L +L   NK K
Sbjct: 1   MITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRC-GEFEKNNPDLYLKELLNLAENNKGK 59

Query: 561 VVAIGECGLDYERFHFCEKE 620
           VVAIGECGLD++R  FC K+
Sbjct: 60  VVAIGECGLDFDRLQFCPKD 79


>BC117485-1|AAI17486.1|  274|Homo sapiens TatD DNase domain
           containing 3 protein.
          Length = 274

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
 Frame = +3

Query: 339 DLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS-RTDSKLFTTVGCHPSRA*GSIQSDD 515
           DLD VLE+A  + +  ++       + +K ++LS R +  +   +G HP +  G    D 
Sbjct: 23  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ--GLPPEDQ 80

Query: 516 YLQGLRDL------ISGNKDKVVAIGECGLDY 593
               L+DL      I   KD+++AIGE GLD+
Sbjct: 81  RSVTLKDLDVALPIIENYKDRLLAIGEVGLDF 112


>BC113638-1|AAI13639.1|  274|Homo sapiens TatD DNase domain
           containing 3 protein.
          Length = 274

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
 Frame = +3

Query: 339 DLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS-RTDSKLFTTVGCHPSRA*GSIQSDD 515
           DLD VLE+A  + +  ++       + +K ++LS R +  +   +G HP +  G    D 
Sbjct: 23  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ--GLPPEDQ 80

Query: 516 YLQGLRDL------ISGNKDKVVAIGECGLDY 593
               L+DL      I   KD+++AIGE GLD+
Sbjct: 81  RSVTLKDLDVALPIIENYKDRLLAIGEVGLDF 112


>BC048115-1|AAH48115.1|  275|Homo sapiens TATDN3 protein protein.
          Length = 275

 Score = 38.3 bits (85), Expect = 0.022
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
 Frame = +3

Query: 339 DLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS-RTDSKLFTTVGCHPSRA*GSIQSDD 515
           DLD VLE+A  + +  ++       + +K ++LS R +  +   +G HP +  G    D 
Sbjct: 24  DLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ--GLPPEDQ 81

Query: 516 YLQGLRDL------ISGNKDKVVAIGECGLDY 593
               L+DL      I   KD+++AIGE GLD+
Sbjct: 82  RSVTLKDLDVALPIIENYKDRLLAIGEVGLDF 113


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,080,727
Number of Sequences: 237096
Number of extensions: 1402601
Number of successful extensions: 6820
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6814
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)