Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00788
         (621 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-258|AAM70836.2|  313|Drosophila melanogaster CG3358-PB,...   149   3e-36
AY122155-1|AAM52667.1|  291|Drosophila melanogaster LD08659p pro...   126   2e-29
AE013599-259|AAF57413.1|  291|Drosophila melanogaster CG3358-PA,...   126   2e-29
AY060255-1|AAL25294.1|  319|Drosophila melanogaster GH08045p pro...    64   1e-10
AE014297-2969|AAF55876.1|  319|Drosophila melanogaster CG3308-PA...    64   1e-10

>AE013599-258|AAM70836.2|  313|Drosophila melanogaster CG3358-PB,
           isoform B protein.
          Length = 313

 Score =  149 bits (361), Expect = 3e-36
 Identities = 66/121 (54%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
 Frame = +3

Query: 261 KYIDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELS 440
           KYIDIGANLTD M++G Y G++KHEPDL +VLERAW  G+ K+IVT G L+D  +A+EL+
Sbjct: 11  KYIDIGANLTDPMFQGCYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELA 70

Query: 441 RTDSKLFTTVGCHPSRA*GSI-QSDDYLQGLRDLISGNKDKVVAIGECGLDYERFHFCEK 617
             D +++TTVG HP+R    +   + Y   LR  I  N+ KV A+GECGLDY+R HFC +
Sbjct: 71  SKDERIYTTVGTHPTRCEEFVPDPEGYYDQLRSRIKANRTKVRAVGECGLDYDRLHFCAQ 130

Query: 618 E 620
           E
Sbjct: 131 E 131


>AY122155-1|AAM52667.1|  291|Drosophila melanogaster LD08659p
           protein.
          Length = 291

 Score =  126 bits (305), Expect = 2e-29
 Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = +3

Query: 297 MYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELSRTDSKLFTTVGC 476
           M++G Y G++KHEPDL +VLERAW  G+ K+IVT G L+D  +A+EL+  D +++TTVG 
Sbjct: 1   MFQGCYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASKDERIYTTVGT 60

Query: 477 HPSRA*GSI-QSDDYLQGLRDLISGNKDKVVAIGECGLDYERFHFCEKE 620
           HP+R    +   + Y   LR  I  N+ KV A+GECGLDY+R HFC +E
Sbjct: 61  HPTRCEEFVPDPEGYYDQLRSRIKANRTKVRAVGECGLDYDRLHFCAQE 109


>AE013599-259|AAF57413.1|  291|Drosophila melanogaster CG3358-PA,
           isoform A protein.
          Length = 291

 Score =  126 bits (305), Expect = 2e-29
 Identities = 55/109 (50%), Positives = 76/109 (69%), Gaps = 1/109 (0%)
 Frame = +3

Query: 297 MYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELSRTDSKLFTTVGC 476
           M++G Y G++KHEPDL +VLERAW  G+ K+IVT G L+D  +A+EL+  D +++TTVG 
Sbjct: 1   MFQGCYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASKDERIYTTVGT 60

Query: 477 HPSRA*GSI-QSDDYLQGLRDLISGNKDKVVAIGECGLDYERFHFCEKE 620
           HP+R    +   + Y   LR  I  N+ KV A+GECGLDY+R HFC +E
Sbjct: 61  HPTRCEEFVPDPEGYYDQLRSRIKANRTKVRAVGECGLDYDRLHFCAQE 109


>AY060255-1|AAL25294.1|  319|Drosophila melanogaster GH08045p
           protein.
          Length = 319

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +3

Query: 267 IDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELSRT 446
           ID+GANLT+          +K+  DLD V++RA  +G+ K++V G S++ SK+A+ LSR 
Sbjct: 38  IDVGANLTN----------KKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRI 87

Query: 447 -DSKLFTTVGCHPSRA*GSIQSDDYLQGLRDLISGNKDKVVAIGECGLDYER 599
               +++T G HP  +   ++       L  +      + VAIG CGLDY+R
Sbjct: 88  YPDIIYSTAGIHPHDSKSIVEEPATWFDLEHI--AQAQECVAIGPCGLDYQR 137


>AE014297-2969|AAF55876.1|  319|Drosophila melanogaster CG3308-PA
           protein.
          Length = 319

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
 Frame = +3

Query: 267 IDIGANLTDDMYKGVYNGSRKHEPDLDVVLERAWTSGINKIIVTGGSLEDSKKAIELSRT 446
           ID+GANLT+          +K+  DLD V++RA  +G+ K++V G S++ SK+A+ LSR 
Sbjct: 38  IDVGANLTN----------KKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRI 87

Query: 447 -DSKLFTTVGCHPSRA*GSIQSDDYLQGLRDLISGNKDKVVAIGECGLDYER 599
               +++T G HP  +   ++       L  +      + VAIG CGLDY+R
Sbjct: 88  YPDIIYSTAGIHPHDSKSIVEEPATWFDLEHI--AQAQECVAIGPCGLDYQR 137


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,832,729
Number of Sequences: 53049
Number of extensions: 436556
Number of successful extensions: 1448
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1441
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)