Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00787
         (763 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    47   1e-05
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    41   0.001
U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical pr...    36   0.024
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   2.1  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    30   2.1  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   2.1  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
 Frame = +3

Query: 12  MKKVDVPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGGEPDK-DTCRGDGGSPLVCPIDY 188
           ++++ VP++    C S      +GR      + +CAG    K D+C+GD G PL+C  D 
Sbjct: 196 LREIHVPLLSTLFCSSL--PNYIGRIHL--PSMLCAGYSYGKIDSCQGDSGGPLMCARD- 250

Query: 189 EKNRYVQYGIVAWGIGCGEDG 251
               +   G+V+WGIGC   G
Sbjct: 251 --GHWELTGVVSWGIGCARPG 269


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
 Frame = +3

Query: 27  VPVVDRNTCQSQLRRTRLGRFFQLHSTFMCAGG-EPDKDTCRGDGGSPLVCPIDYEKNRY 203
           +P+++R  C +  +      +  +  +  CAG  E   D+C+GD G P  C    E   +
Sbjct: 173 IPIINRFDCVNSSQI-----YSSMSRSAFCAGYLEGGIDSCQGDSGGPFAC--RREDGAF 225

Query: 204 VQYGIVAWGIGCGE 245
           V  G+++WG GC +
Sbjct: 226 VLAGVISWGDGCAQ 239


>U28735-5|AAF99955.3|  279|Caenorhabditis elegans Hypothetical
           protein F48E3.4 protein.
          Length = 279

 Score = 36.3 bits (80), Expect = 0.024
 Identities = 15/27 (55%), Positives = 19/27 (70%)
 Frame = +3

Query: 144 CRGDGGSPLVCPIDYEKNRYVQYGIVA 224
           C  D G+PL C +D E N+YVQ GIV+
Sbjct: 197 CWDDIGAPLECVLDVENNKYVQVGIVS 223


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 102 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 230
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 102 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 230
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 102 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 230
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 102 STFMCAGGEPDKDTCRGDGGSPLVCPIDYEKNRY--VQYGIVAWG 230
           S   C+GG+   DTC G+    LVC     K  Y  + +G  A+G
Sbjct: 86  SPLFCSGGQ---DTCEGEMSETLVCGTTTTKEPYSTIVFGTTAYG 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,367,716
Number of Sequences: 27780
Number of extensions: 256615
Number of successful extensions: 539
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)