Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00780
(686 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 25 0.77
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 25 0.77
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 25 0.77
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.1
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 5.4
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 7.2
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 21 7.2
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 21 7.2
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 9.5
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 9.5
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 9.5
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 24.6 bits (51), Expect = 0.77
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 25 RVRIIPVKRSLRENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 165
+V + V + R+ + +F+ +Q K K TVV+RE+ +S+A
Sbjct: 320 QVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 24.6 bits (51), Expect = 0.77
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 25 RVRIIPVKRSLRENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 165
+V + V + R+ + +F+ +Q K K TVV+RE+ +S+A
Sbjct: 320 QVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 24.6 bits (51), Expect = 0.77
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 25 RVRIIPVKRSLRENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 165
+V + V + R+ + +F+ +Q K K TVV+RE+ +S+A
Sbjct: 320 QVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.1
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +1
Query: 541 NREFLLPKGTNPEAIKSSLSRDGVLT 618
N + L PKG N I+ + +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -3
Query: 594 RRLNG--LRICSLGQQKLPVVFSVHRFRI 514
R L G L + ++ L V+F++H+FRI
Sbjct: 633 RSLRGPELNYTTTEKELLGVIFALHKFRI 661
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -3
Query: 624 FHGKHTVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 511
FH H + +RR+ L ++++ + F R +++
Sbjct: 242 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 279
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.4 bits (43), Expect = 7.2
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 377 SLSYPSDWARQAVCCHY 327
+L+YPS + + C HY
Sbjct: 358 NLTYPSYYNQDVSCTHY 374
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -3
Query: 624 FHGKHTVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 511
FH H + +RR+ L ++++ + F R +++
Sbjct: 24 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 61
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.0 bits (42), Expect = 9.5
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3
Query: 471 STTNYWSTPNT 503
STTN+W T T
Sbjct: 1178 STTNHWQTKTT 1188
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +1
Query: 559 PKGTNPEAIKSSLSRDGVLTVEAPLATTRHHGQ 657
P G++P+ SS S + ++ HH Q
Sbjct: 40 PSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQ 72
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 21.0 bits (42), Expect = 9.5
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +1
Query: 559 PKGTNPEAIKSSLSRDGVLTVEAPLATTRHHGQ 657
P G++P+ SS S + ++ HH Q
Sbjct: 40 PSGSSPQHSSSSASTSPAARMYPYVSAAHHHHQ 72
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,588
Number of Sequences: 336
Number of extensions: 3035
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -