Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00780
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 89 4e-18
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 89 4e-18
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 89 4e-18
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 39 0.004
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 39 0.004
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 37 0.016
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 36 0.021
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 35 0.063
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 35 0.063
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 35 0.063
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 35 0.063
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 34 0.083
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 34 0.083
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 34 0.083
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 34 0.11
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 34 0.11
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 34 0.11
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 34 0.11
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.14
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 33 0.14
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 33 0.19
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.25
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.25
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.25
U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical pr... 33 0.25
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 33 0.25
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.25
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 31 0.58
AC006693-2|AAF60378.2| 334|Caenorhabditis elegans Serpentine re... 31 0.77
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 31 1.0
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 30 1.3
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 30 1.3
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 30 1.3
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 29 2.4
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 29 2.4
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 28 5.4
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 28 5.4
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/99 (52%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 365 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTT 544
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEE +
Sbjct: 12 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 71
Query: 545 GSFCCPR----EQILRPLSLRCPGTVCLPWKRHWPQLAI 649
F PR EQI LS TV P PQLAI
Sbjct: 72 QEFLLPRGTNPEQISSTLSTDGVLTVEAP----LPQLAI 106
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/99 (52%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 365 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTT 544
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEE +
Sbjct: 109 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 168
Query: 545 GSFCCPR----EQILRPLSLRCPGTVCLPWKRHWPQLAI 649
F PR EQI LS TV P PQLAI
Sbjct: 169 QEFLLPRGTNPEQISSTLSTDGVLTVEAP----LPQLAI 203
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +3
Query: 138 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSK 251
+R I + ++SVID EF ++R+RF+ EMR++EEEM +
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKR 40
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 88.6 bits (210), Expect = 4e-18
Identities = 52/99 (52%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Frame = +2
Query: 365 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTT 544
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHAKHEE +
Sbjct: 123 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 182
Query: 545 GSFCCPR----EQILRPLSLRCPGTVCLPWKRHWPQLAI 649
F PR EQI LS TV P PQLAI
Sbjct: 183 QEFLLPRGTNPEQISSTLSTDGVLTVEAP----LPQLAI 217
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/38 (47%), Positives = 29/38 (76%)
Frame = +3
Query: 138 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSK 251
+R I + ++SVID EF ++R+RF+ EMR++EEEM +
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEEMKR 54
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVE 624
V R + R++ LP G PE IKS LS +GVLTV+
Sbjct: 96 VERHFVRKYNLPTGVRPEQIKSELSNNGVLTVK 128
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 428 DVSQYTPEEIVVKTVDNKLLVHAKHEE 508
DVSQ+ PEE+ V VDN+L++ KH E
Sbjct: 62 DVSQFEPEELKVNIVDNQLIIEGKHNE 88
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVE 624
V R + R++ LP G PE IKS LS +GVLTV+
Sbjct: 95 VERHFVRKYNLPTGVRPEQIKSELSNNGVLTVK 127
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 428 DVSQYTPEEIVVKTVDNKLLVHAKHEE 508
DVSQ+ PEE+ V VDN+L++ KH E
Sbjct: 61 DVSQFEPEELKVNIVDNQLIIEGKHNE 87
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +2
Query: 371 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEE 508
+NS ++ D+ + + D Q+ PEEI VKT+D+ L++ +HE+
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHED 145
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 538 YNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLATTRHHG 654
+ R F LPK PE+++S L+ DG LT++A + G
Sbjct: 124 FKRRFPLPKAVAPESVQSQLTADGHLTIDAKAPEPKQEG 162
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = +2
Query: 344 LAEPSHWDSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEE 508
++ PS S N L + DVS+Y + + V VDN ++V H E
Sbjct: 58 ISSPSVVGSQNGNLTSIRVTNTSFHAILDVSKYDADSLKVTVVDNNIIVEGSHGE 112
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE + K+ + + ++R LLP+ + A+ S+LS DG L++EAP
Sbjct: 76 QGEQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE + K+ + + ++R LLP+ + A+ S+LS DG L++EAP
Sbjct: 76 QGEQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE + K+ + + ++R LLP+ + A+ S+LS DG L++EAP
Sbjct: 76 QGEQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE + K+ + + ++R LLP+ + A+ S+LS DG L++EAP
Sbjct: 77 QGEQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 123
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE + K+ + + ++R LLP+ + A+ S+LS DG L++EAP
Sbjct: 76 QGEQELKTDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +2
Query: 356 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHE 505
S WD N +++ + ++ DV +TP+EI VK +LL+H +HE
Sbjct: 12 STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIHCRHE 64
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 496 QTRGESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 627
+TR ++ +V RE NR + LP + +KS L+ GVLT+ A
Sbjct: 64 ETRSDNHG-TVAREINRAYKLPDDVDVSTVKSHLATRGVLTITA 106
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 34.3 bits (75), Expect = 0.083
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE + K+ + + ++R LLP+ + A+ S+LS DG L++EAP
Sbjct: 76 QGEQELKTDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAP 122
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 523 SVYREYNREFLLPKGTNPEAIKSSLSRDGVLTV 621
S+ R R + LPKGT+P IKS L G+L +
Sbjct: 71 SITRSITRCYRLPKGTDPATIKSKLDGSGILHI 103
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 481 ITGPRQTRGESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
I G ++T+ E + R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 33 IEGIQETKSEHGY--LKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKKT 83
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 481 ITGPRQTRGESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
I G ++T+ E + R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 80 IEGIQETKSEHGY--LKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKKT 130
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 481 ITGPRQTRGESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
I G ++T+ E + R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 79 IEGIQETKSEHGY--LKRSFSKMILLPEDADLPSVKSAISNEGKLQIEAPKKT 129
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 627
V RE +R + LP+ +P ++S L+ GVLT+ A
Sbjct: 76 VNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 109
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 627
V RE +R + LP+ +P ++S L+ GVLT+ A
Sbjct: 73 VNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 106
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 627
V RE +R + LP+ +P ++S L+ GVLT+ A
Sbjct: 76 VNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 109
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 33.1 bits (72), Expect = 0.19
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 508 ESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
E+D S + Y++ +LP+ + + S+LS DG L +E P
Sbjct: 84 ENDNISTTQTYSKSIVLPEDVDVTHLSSNLSEDGKLLIEVP 124
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 532 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 86 RSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKKT 121
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 532 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 94 RSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKKT 129
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 532 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 94 RSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKKT 129
>U53180-6|AAA96288.1| 202|Caenorhabditis elegans Hypothetical
protein D1014.4 protein.
Length = 202
Score = 32.7 bits (71), Expect = 0.25
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Frame = +3
Query: 192 SSIR--ERFDAEMRKMEEEMSKFDQ-NS*TEKATISSRAQLARRHLHSIVTADSLPSPVT 362
SSI+ E+ + RK +E+ ++ S E TIS +Q+A + L IV+ PV+
Sbjct: 91 SSIKSEEKLEKSQRKDDEDNEYSNELQSVQELRTISGESQMAEQALDYIVSKTFKKIPVS 150
Query: 363 GIA*TRRSFKTRVTARLSSFALMSASILPKRSLLRLSTTNYWSTPNTR 506
+R F +SF + + R +L +S+ N S P T+
Sbjct: 151 SQKMSRDIFNVCFVFSNNSFIQSTRDAINYRQILVISSLNDISVPLTQ 198
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 532 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 95 RSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKKT 130
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 32.7 bits (71), Expect = 0.25
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 532 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLAT 639
R +++ LLP+ + ++KS++S +G L +EAP T
Sbjct: 94 RSFSKMILLPEDVDLTSVKSAISNEGKLQIEAPKKT 129
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 31.5 bits (68), Expect = 0.58
Identities = 15/47 (31%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Frame = +1
Query: 502 RGESDTKSVY----REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
+GE D ++ + + ++R LLP+ + ++ ++LS DG L +EAP
Sbjct: 78 QGEHDVENEHGASRKSFSRMILLPEDVDITSVATNLSNDGKLCIEAP 124
>AC006693-2|AAF60378.2| 334|Caenorhabditis elegans Serpentine
receptor, class h protein271 protein.
Length = 334
Score = 31.1 bits (67), Expect = 0.77
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = -2
Query: 580 PQDLFPWATKTPCCILCTQISYQILLVFGVDQ*FVVDSLNNDLFGSILADIKAKLESLAV 401
P +L W TK +L T I+Y +L VF V V+ ++ LF + +K +++ LA
Sbjct: 168 PSNLPNWITKADVFVLATDITYSLLSVFLV----VIFIISEILF--FIFYVKIQMKCLAR 221
Query: 400 TLVLNE 383
TL L++
Sbjct: 222 TLKLSK 227
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 532 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 630
R + R+F LPK + I + ++++G +T++AP
Sbjct: 93 RSFTRQFTLPKDVDLAHIHTVINKEGQMTIDAP 125
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/58 (22%), Positives = 24/58 (41%)
Frame = +2
Query: 395 EGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE 568
E + ++ DV+ + PEE+ V + L + HE + T F P++
Sbjct: 47 ENTAQKFCVKLDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQFTLPKD 104
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +2
Query: 440 YTPEEIVVKTVDNKLLVHAKHEENLIRNLCTENTTGSFCCPRE--QILRPLSLRCPGTVC 613
Y P E V+ + N ++ K+E L+R++ + FC E I+R ++ C
Sbjct: 180 YAPSEFVLSIIKNSPVIKLKYERFLLRDMVNSHPHLKFCVGNECPVIIRSTEVKPKRVTC 239
Query: 614 L 616
+
Sbjct: 240 M 240
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 547 EFLLPKGTNPEAIKSSLSRDGVLTVEAPLATTR 645
+F P+ T+P +K+ +++ GV T +AP+ T+
Sbjct: 117 DFGYPQNTDPGVLKTFITQQGVRTADAPVPVTK 149
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 30.3 bits (65), Expect = 1.3
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +1
Query: 547 EFLLPKGTNPEAIKSSLSRDGVLTVEAPLATTR 645
+F P+ T+P +K+ +++ GV T +AP+ T+
Sbjct: 117 DFGYPQNTDPGVLKTFITQQGVRTADAPVPVTK 149
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 627
V R R + LPK + + IKS+L G+L +EA
Sbjct: 73 VSRNITRCYKLPKNVDMKTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 526 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 627
V R R + LPK + + IKS+L G+L +EA
Sbjct: 73 VSRNITRCYKLPKNVDMKTIKSNLDSHGILHIEA 106
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical protein
K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 508 ESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLATTRHHGQEHSYPE 675
+ + + V +E N E + + E K R+G+L V AP+ +R + PE
Sbjct: 1995 DEENEEVSKEENNELIDSEDVMDEVPKGFYEREGILRVGAPMEPSRSPHTVTNTPE 2050
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 508 ESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLATTRHHGQEHSYPE 675
+ + + V +E N E + + E K R+G+L V AP+ +R + PE
Sbjct: 1995 DEENEEVSKEENNELIDSEDVMDEVPKGFYEREGILRVGAPMEPSRSPHTVTNTPE 2050
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 508 ESDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLATTRHHGQEHSYPE 675
+ + + V +E N E + + E K R+G+L V AP+ +R + PE
Sbjct: 1995 DEENEEVSKEENNELIDSEDVMDEVPKGFYEREGILRVGAPMEPSRSPHTVTNTPE 2050
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,060,368
Number of Sequences: 27780
Number of extensions: 306863
Number of successful extensions: 1026
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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