Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00772X
         (575 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0433 - 22891261-22891509,22892181-22892301,22892405-228924...    71   7e-13
04_04_0211 - 23636377-23636532,23636624-23636805,23637853-236379...    70   2e-12
02_02_0470 - 10700092-10700505                                         30   1.5  
10_08_0951 - 21769342-21769752                                         29   3.5  
05_07_0220 + 28482589-28483752                                         29   3.5  
09_02_0616 + 11256242-11256430,11256981-11257225,11257317-11257878     28   6.1  
02_05_0781 + 31715100-31715672                                         28   6.1  
03_02_0028 - 5118621-5119448                                           27   8.1  

>02_04_0433 -
           22891261-22891509,22892181-22892301,22892405-22892496,
           22892692-22892755,22892855-22892920,22893102-22893193,
           22893991-22894050,22894181-22894270,22894484-22894613,
           22895066-22895157,22895299-22895373,22895663-22895754,
           22896496-22896586,22897541-22897574,22897745-22897791,
           22899110-22899209,22899300-22899436,22900837-22901015,
           22901146-22901188,22901264-22901297,22901839-22901948,
           22902043-22902224,22903062-22903168,22903266-22903480
          Length = 833

 Score = 70.9 bits (166), Expect = 7e-13
 Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
 Frame = +2

Query: 275 FYPTQE-KIRASSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLV 451
           FYP  + K RA S  +    +  ++R  +  GTV ILLAGR+ GKRVV +  L SGLLL+
Sbjct: 50  FYPADDVKPRAPSTRKA---NPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLI 106

Query: 452 TGPFAFNSCPLRRIPQRYVSA 514
           TGPF  N  P+RR+ Q YV A
Sbjct: 107 TGPFKINGVPIRRVNQAYVIA 127


>04_04_0211 -
           23636377-23636532,23636624-23636805,23637853-23637959,
           23637997-23638280
          Length = 242

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 40/80 (50%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = +2

Query: 281 PTQEKIRASSGGRPFS--KHVRRIRPNLKIGTVCILLAGRHAGKRVVLVGILPSGLLLVT 454
           PT+ +  +SS    FS  + +  +R ++  GTV ILLAGR  GKRVV +  L SGLLLVT
Sbjct: 71  PTKLRSPSSSNLPEFSLFRFILLMRSSITPGTVLILLAGRFMGKRVVFLKQLKSGLLLVT 130

Query: 455 GPFAFNSCPLRRIPQRYVSA 514
           GPF  N  P+RR+ Q YV A
Sbjct: 131 GPFKINGVPIRRVNQPYVIA 150


>02_02_0470 - 10700092-10700505
          Length = 137

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 356 LKIGTVCILLAGRHAGKRVVLVGILPSG 439
           LK G   ILL GR+AG++ V+V +   G
Sbjct: 5   LKPGKAVILLQGRYAGRKAVIVRVFEEG 32


>10_08_0951 - 21769342-21769752
          Length = 136

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 356 LKIGTVCILLAGRHAGKRVVLVGILPSG 439
           LK G   ILL GR AG++ V+V +   G
Sbjct: 5   LKPGKAVILLQGRFAGRKAVIVRVFEEG 32


>05_07_0220 + 28482589-28483752
          Length = 387

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 428 LPSGLLLVTGPFAFNSCPLRRIPQRYVSAPPPEFHSATSNCQNTS 562
           L S  LL  G   F  C     P R +S PPP   ++ S+C ++S
Sbjct: 30  LSSPNLLTNGGDLFYGCYSPFSPTRVLSPPPPRRAASFSHCSSSS 74


>09_02_0616 + 11256242-11256430,11256981-11257225,11257317-11257878
          Length = 331

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 479 PLRRIPQRYVSAPPPEFHSATSNCQN 556
           P  +IP RY+SAPPP   SAT+   +
Sbjct: 6   PHLQIPDRYISAPPPP-ASATARASS 30


>02_05_0781 + 31715100-31715672
          Length = 190

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/48 (27%), Positives = 25/48 (52%)
 Frame = +2

Query: 431 PSGLLLVTGPFAFNSCPLRRIPQRYVSAPPPEFHSATSNCQNTSMMIT 574
           P+G        +  + P R   +R+ +APPP   ++TS   +T+++ T
Sbjct: 41  PAGKAAAAAVVSAAAQPQRAAKKRHAAAPPPRPSASTSRRSSTTVVAT 88


>03_02_0028 - 5118621-5119448
          Length = 275

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 458 PFAFNSCPLRRIPQRYVSAPPP 523
           PF   SCP RR+P+R    PPP
Sbjct: 32  PFFPGSCP-RRVPRRRPQQPPP 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,737,410
Number of Sequences: 37544
Number of extensions: 356300
Number of successful extensions: 870
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)