Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00771
(706 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040649-5|AAK72086.3| 327|Caenorhabditis elegans Serpentine re... 32 0.46
AF016664-3|AAB66069.2| 315|Caenorhabditis elegans Serpentine re... 32 0.46
Z48621-5|CAA88543.1| 136|Caenorhabditis elegans Hypothetical pr... 30 1.4
AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical ... 29 2.4
Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical ... 29 3.2
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF016423-5|AAB65320.1| 230|Caenorhabditis elegans Hypothetical ... 28 7.5
U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast... 27 9.9
AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical ... 27 9.9
AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-Co... 27 9.9
AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical ... 27 9.9
>AF040649-5|AAK72086.3| 327|Caenorhabditis elegans Serpentine
receptor, class i protein39 protein.
Length = 327
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 329 AERIDVKRPSLPVWQSNGTSRDSFFTFLLQ 240
+E+IDV R SL V+Q+ T D FTFL+Q
Sbjct: 37 SEKIDVFRKSLLVFQATCTVTDIHFTFLMQ 66
>AF016664-3|AAB66069.2| 315|Caenorhabditis elegans Serpentine
receptor, class i protein38 protein.
Length = 315
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 329 AERIDVKRPSLPVWQSNGTSRDSFFTFLLQ 240
+E+IDV R SL V+Q+ T D FTFL+Q
Sbjct: 37 SEKIDVFRKSLLVFQATCTVTDIHFTFLMQ 66
>Z48621-5|CAA88543.1| 136|Caenorhabditis elegans Hypothetical
protein R07B1.6 protein.
Length = 136
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 355 RRTENCMVRY-TTTGTVSPRTCTTRNTDTL 441
R T++C TTT T++P TCTT TD +
Sbjct: 16 RITDSCAATSGTTTTTIAPTTCTTCTTDLI 45
>AL132952-1|CAB61134.2| 214|Caenorhabditis elegans Hypothetical
protein Y51H4A.1 protein.
Length = 214
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/59 (25%), Positives = 32/59 (54%)
Frame = +2
Query: 521 VFQKHKESAYVRPYTRSELENQGVQVRSVSVETPGGQPNTLNTYWMLSDVNLSRGLDFS 697
V + H E+A V Y E++ + +V + +TP G P + ++ + S++ + ++FS
Sbjct: 70 VIELHTEAAPVENYLEEEIQIKVPEVEEDTEKTPAGSPKSTSS-CISSEILSEQSIEFS 127
>Z54270-8|CAA91029.2| 301|Caenorhabditis elegans Hypothetical
protein F11C1.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 467 GHNDARSILLPLARYIDDVFQKHKESAYVRPYTRSELENQGVQVRSV 607
GH D +LL + YI D F K R N G+++R V
Sbjct: 115 GHGDGAYMLLSILPYIKDDFNLRKAVCLFPTIERMTESNHGIRLRKV 161
>AF039039-1|AAB94180.2| 653|Caenorhabditis elegans Hypothetical
protein T08B1.6 protein.
Length = 653
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 333 MLESSALSPNRELYGSIHNNGHSFTAYMHDPEHRYLEQFGVIA 461
+ S+ L+PN L+G N H +T Y E + G++A
Sbjct: 48 LTRSAQLNPNAPLFGESVNGRHVYTTYREAVEEATIIGSGIVA 90
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -3
Query: 608 TRTSLARPGSRAQIWYKDARRQIPCASGKRHRCSVPAVEE--WIAHRCGLISDNTKLFKV 435
TR+ L R G R W+KD Q A SVP E W+ ++ D KL KV
Sbjct: 41 TRSELMRMGGRLVKWFKDVHAQESGADHTLKLHSVPCRVEVGWMFNQWDGNQDG-KLSKV 99
Query: 434 SVFRVVHVRGETVPV 390
VV V E P+
Sbjct: 100 GF--VVSVEAELRPI 112
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 321 TLGNMLESSALSPNRELYGSIHNNGHSFTA-YMHDPEHRYLEQFGVIADE 467
T G S +PNR+ Y + NG+ +A HD R LE+ GV+ +E
Sbjct: 961 TNGCYSPSCRSNPNRKCYSPMCRNGYLVSAKQAHD--ERKLEESGVLGEE 1008
>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical protein
F26H11.2b protein.
Length = 1693
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 321 TLGNMLESSALSPNRELYGSIHNNGHSFTA-YMHDPEHRYLEQFGVIADE 467
T G S +PNR+ Y + NG+ +A HD R LE+ GV+ +E
Sbjct: 961 TNGCYSPSCRSNPNRKCYSPMCRNGYLVSAKQAHD--ERKLEESGVLGEE 1008
>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical protein
F26H11.2a protein.
Length = 1691
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +3
Query: 321 TLGNMLESSALSPNRELYGSIHNNGHSFTA-YMHDPEHRYLEQFGVIADE 467
T G S +PNR+ Y + NG+ +A HD R LE+ GV+ +E
Sbjct: 961 TNGCYSPSCRSNPNRKCYSPMCRNGYLVSAKQAHD--ERKLEESGVLGEE 1008
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/103 (25%), Positives = 37/103 (35%)
Frame = +1
Query: 223 IDEMERWRRNVKKLSRLVPLDCQTGRLGLLTSIRSATCWSPAPSRRTENCMVRYTTTGTV 402
+D++ W ++ K S L T+ R T P R T TTT T
Sbjct: 118 VDKISEWLKSEKDESSWKKFTTTEEPLETTTTKRIIT----TPKRTTLRKTTTTTTTSTT 173
Query: 403 SPRTCTTRNTDTLNNLVLSLMRPQRCAIHSSTAGTLHR*RFPE 531
S T TT T + + P++ T T H FP+
Sbjct: 174 STSTTTTEKPTTAT--TTARVTPKKSTKRIGTGTTAHPPLFPK 214
>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 163 TSVRYAMAGPESCRRSLFVTIDEMERWRRNVKKLSRL 273
TS+ YA PE R D MERW K +RL
Sbjct: 1405 TSIPYARQNPEVFRGLWSAICDTMERWLFTPNKSTRL 1441
>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical protein
F11A10.4 protein.
Length = 1646
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +1
Query: 163 TSVRYAMAGPESCRRSLFVTIDEMERWRRNVKKLSRL 273
TS+ YA PE R D MERW K +RL
Sbjct: 1405 TSIPYARQNPEVFRGLWSAICDTMERWLFTPNKSTRL 1441
>AF016423-5|AAB65320.1| 230|Caenorhabditis elegans Hypothetical
protein F40A3.2 protein.
Length = 230
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -1
Query: 502 QR*KNGSRIVVASSAITPNCSRYLCSGSCMYAVKLCPLLCIEPYSSLFGERALDSNMLPS 323
+R +NGS I +C C G+ M L C PYS + E A ++
Sbjct: 56 ERLQNGSCIECELGWAGTDCDIIDCHGNGMPNYDLTECTCTVPYSGKYCEIADTKDIYKW 115
Query: 322 VSMSRGRVCPFGNLT-VPVAI 263
+ + P G LT +P+A+
Sbjct: 116 YNNFTSSIGPIGILTIIPLAL 136
>U39848-4|AAA80691.1| 444|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 2, isoform a protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 267 ATGTVRLPNGQTRPLDIDTLGNMLESSALSPNRELYGSIHNN 392
A GT L G P+ T G +L + SP+R+LYG+ N
Sbjct: 42 AKGTSSLGGGGFSPIPT-TSGGVLNVAQSSPSRDLYGAQRPN 82
>AL110500-1|CAB60426.3| 780|Caenorhabditis elegans Hypothetical
protein Y87G2A.1 protein.
Length = 780
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = -1
Query: 562 IRTHVGRFLVLLENVIDVACQR*KNGSRIVVASSAITPNCSRYLCSGSCMYAVK 401
IR F + L +++ A Q ++ IV +S C R + G C+Y +K
Sbjct: 73 IRDGAPYFSLNLPDLLSKAHQITQDTGVIVRLTSCFNKKCQRQVACGGCLYTIK 126
>AF127558-1|AAD21088.1| 419|Caenorhabditis elegans isovaleryl-CoA
dehydrogenase precursorprotein.
Length = 419
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 571 RSGIRTHVGRFLVLLENVIDVACQR*KNGSRI-VVASSAITPNCSRYLCSGSCMYAVKLC 395
R+ +G F +L + D+ + S + +VA +A N S C+G +Y + C
Sbjct: 304 RTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKC 363
Query: 394 PLLCIEPYSSLFG 356
+C++ L G
Sbjct: 364 TQVCLDAIQILGG 376
>AF038605-3|AAB92016.1| 419|Caenorhabditis elegans Hypothetical
protein C02B10.1 protein.
Length = 419
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 571 RSGIRTHVGRFLVLLENVIDVACQR*KNGSRI-VVASSAITPNCSRYLCSGSCMYAVKLC 395
R+ +G F +L + D+ + S + +VA +A N S C+G +Y + C
Sbjct: 304 RTAFGQKIGSFQLLQGKLADMYTTLNASRSYLYMVAKAADKGNVSNKDCAGVILYVAEKC 363
Query: 394 PLLCIEPYSSLFG 356
+C++ L G
Sbjct: 364 TQVCLDAIQILGG 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,576,768
Number of Sequences: 27780
Number of extensions: 394891
Number of successful extensions: 1267
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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