Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00770
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060618-1|AAL28166.1|  665|Drosophila melanogaster GH04232p pro...    51   1e-06
AE014134-235|AAF51389.1|  665|Drosophila melanogaster CG5397-PA ...    51   1e-06
X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin prot...    29   7.2  
AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p pro...    29   7.2  
AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC...    29   7.2  
AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB...    29   7.2  
AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA...    29   7.2  

>AY060618-1|AAL28166.1|  665|Drosophila melanogaster GH04232p
           protein.
          Length = 665

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = +2

Query: 512 DALFNFPAYQSVRQWSAGGPAYLYSFEYVGNLSKGSYFLPGLAL 643
           D LFN PA  + + WS   PA++YSFEY G  SKG  FL GL +
Sbjct: 462 DVLFNLPAVLTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPI 505



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +2

Query: 17  LIKCLRQVPVEKLIMADEDLSMDNAMDTMKFLDEISGRSGAGARVEGEDDKRALPPIVSE 196
           ++ CLR    E +I  D+ +  +  +     +  ++G  G    +E EDD RALP ++  
Sbjct: 295 IVNCLRSKSAEDIIKNDDKVQTER-LAGRALVKGLTGNVGFQPHIESEDDGRALPSLIVG 353

Query: 197 KPADSLKKKT-KRPPMLTGV 253
           +P   LK       P+LTGV
Sbjct: 354 EPEQQLKSSNFSGIPLLTGV 373


>AE014134-235|AAF51389.1|  665|Drosophila melanogaster CG5397-PA
           protein.
          Length = 665

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/44 (52%), Positives = 28/44 (63%)
 Frame = +2

Query: 512 DALFNFPAYQSVRQWSAGGPAYLYSFEYVGNLSKGSYFLPGLAL 643
           D LFN PA  + + WS   PA++YSFEY G  SKG  FL GL +
Sbjct: 462 DVLFNLPAVLTTQVWSRLAPAFMYSFEYNGTKSKGINFLKGLPI 505



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
 Frame = +2

Query: 17  LIKCLRQVPVEKLIMADEDLSMDNAMDTMKFLDEISGRSGAGARVEGEDDKRALPPIVSE 196
           ++ CLR    E +I  D+ +  +  +     +  ++G  G    +E EDD RALP ++  
Sbjct: 295 IVNCLRSKSAEDIIKNDDKVQTER-LAGRALVKGLTGNVGFQPHIESEDDGRALPSLIVG 353

Query: 197 KPADSLKKKT-KRPPMLTGV 253
           +P   LK       P+LTGV
Sbjct: 354 EPEQQLKSSNFSGIPLLTGV 373


>X53286-1|CAA37380.1| 1023|Drosophila melanogaster glutactin
           protein.
          Length = 1023

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 518 LFNFPAYQSVRQWSAGGPAYLYSFEYVG 601
           L+  P   S+ Q     PAYLY+F+Y G
Sbjct: 457 LYRAPVINSISQSYRSVPAYLYTFDYRG 484


>AY069776-1|AAL39921.1| 1026|Drosophila melanogaster SD01663p
           protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 518 LFNFPAYQSVRQWSAGGPAYLYSFEYVG 601
           L+  P   S+ Q     PAYLY+F+Y G
Sbjct: 457 LYRAPVINSISQSYRSVPAYLYTFDYRG 484


>AE014134-1548|AAF52697.1| 1026|Drosophila melanogaster CG9280-PC,
           isoform C protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 518 LFNFPAYQSVRQWSAGGPAYLYSFEYVG 601
           L+  P   S+ Q     PAYLY+F+Y G
Sbjct: 457 LYRAPVINSISQSYRSVPAYLYTFDYRG 484


>AE014134-1547|AAN10679.1| 1026|Drosophila melanogaster CG9280-PB,
           isoform B protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 518 LFNFPAYQSVRQWSAGGPAYLYSFEYVG 601
           L+  P   S+ Q     PAYLY+F+Y G
Sbjct: 457 LYRAPVINSISQSYRSVPAYLYTFDYRG 484


>AE014134-1546|AAN10678.1| 1026|Drosophila melanogaster CG9280-PA,
           isoform A protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 518 LFNFPAYQSVRQWSAGGPAYLYSFEYVG 601
           L+  P   S+ Q     PAYLY+F+Y G
Sbjct: 457 LYRAPVINSISQSYRSVPAYLYTFDYRG 484


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,851,805
Number of Sequences: 53049
Number of extensions: 593317
Number of successful extensions: 1835
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)