Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00719X
(336 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical pr... 30 0.36
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 28 1.4
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 28 1.4
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 28 1.4
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 28 1.4
Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical pr... 27 4.4
Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical pr... 27 4.4
AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical... 27 4.4
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 26 7.7
AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical... 26 7.7
AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical... 26 7.7
>U00056-1|AAN65308.2| 476|Caenorhabditis elegans Hypothetical
protein R05H11.1 protein.
Length = 476
Score = 30.3 bits (65), Expect = 0.36
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 330 YSRFSMRNSCWSPTFTGYKYQVCLFY 253
Y RF SC F YKY C+FY
Sbjct: 66 YMRFDDEKSCIGVYFEKYKYNACVFY 91
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 128 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 226
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 128 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 226
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 128 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 226
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1244 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1276
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +2
Query: 128 LSLGKQQRHLQDTEHRTRDVLETGRERGQLRRQ 226
L++GKQ+R L + E+ R + + +ER QL R+
Sbjct: 1484 LAIGKQRRTLAENENLFRKLEQLEKEREQLMRE 1516
>Z82068-6|CAB04901.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 332 GTPGSR*GTAVGRPLSPGINT---RCVSSTGIVRSPG 231
GTP S G +VG L PG +T R + +GI PG
Sbjct: 196 GTPASAFGDSVGSGLQPGSSTGSLRFCNFSGISALPG 232
>Z81069-5|CAB02995.1| 504|Caenorhabditis elegans Hypothetical
protein F25H9.5 protein.
Length = 504
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 120 RLISLWENNNVIFKILNTEHEMYLKLDVNVDSYG 221
RL+S W+N + I EH++ ++L N YG
Sbjct: 282 RLLSEWKNISKIGDKSKKEHDLLMELTQNSSCYG 315
>AL032655-10|CAA21727.1| 1829|Caenorhabditis elegans Hypothetical
protein Y6B3B.1 protein.
Length = 1829
Score = 26.6 bits (56), Expect = 4.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 332 GTPGSR*GTAVGRPLSPGINT---RCVSSTGIVRSPG 231
GTP S G +VG L PG +T R + +GI PG
Sbjct: 196 GTPASAFGDSVGSGLQPGSSTGSLRFCNFSGISALPG 232
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 238 DRTIPVEETHLVFIPGESG 294
DR++P+EE L F P G
Sbjct: 76 DRSVPLEERQLYFFPAHDG 94
>AL132876-37|CAN99761.1| 1156|Caenorhabditis elegans Hypothetical
protein Y105E8A.23b protein.
Length = 1156
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 170 HRTRDVLETGRERGQLRRQEDLGIERFQ 253
H T D+ + GRE G ++ED+ +E+F+
Sbjct: 640 HDTFDIPDFGREFGIGIKKEDVDVEKFR 667
>AL132876-36|CAD21670.3| 1138|Caenorhabditis elegans Hypothetical
protein Y105E8A.23a protein.
Length = 1138
Score = 25.8 bits (54), Expect = 7.7
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +2
Query: 170 HRTRDVLETGRERGQLRRQEDLGIERFQ 253
H T D+ + GRE G ++ED+ +E+F+
Sbjct: 640 HDTFDIPDFGREFGIGIKKEDVDVEKFR 667
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.136 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,067,541
Number of Sequences: 27780
Number of extensions: 129607
Number of successful extensions: 284
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 284
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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