Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00718X
(423 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70851-3|AAB09129.1| 293|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical pr... 29 1.0
U53336-10|AAA96182.2| 125|Caenorhabditis elegans Hypothetical p... 29 1.0
AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H... 29 1.0
AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch (dros... 29 1.0
Z93382-2|CAB07612.2| 639|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z70034-12|CAA93859.1| 235|Caenorhabditis elegans Hypothetical p... 28 3.2
Z68318-9|CAA92698.1| 235|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 27 7.3
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 27 7.3
>U70851-3|AAB09129.1| 293|Caenorhabditis elegans Hypothetical
protein M02B7.4 protein.
Length = 293
Score = 46.0 bits (104), Expect = 1e-05
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Frame = +3
Query: 54 FLCLIFTALVI-GVIARVIYLLIKI-FTTECALYQDSNLRTIFCI--GSGGHTTELLRFM 221
FL TA+++ GV+ ++ ++ + A C+ GSGGHT+E++ +
Sbjct: 3 FLFFFVTAVILFGVLCLTAFMAFQVRHSNHSAKNMPKKDTASLCVVLGSGGHTSEMMELV 62
Query: 222 RNLNCREYYPRCTFLPITISTVNQKFLKQGT-----------------NKVLICLNKIPR 350
++ E + T++ T+++ + G N C+ KIPR
Sbjct: 63 KHFG--EEFDERTYIIADTDTMSEDKVGNGDFQVWNANLQAINHEKSRNNEKFCIEKIPR 120
Query: 351 SRKVNQSYFSSVFSTIYSTLITV 419
SR+V QSY +S+ STI +T V
Sbjct: 121 SREVGQSYLTSIGSTINATAFAV 143
>Z68006-7|CAA91995.2| 783|Caenorhabditis elegans Hypothetical
protein K09C8.1 protein.
Length = 783
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 45 ILSFLCLIFTALVIGVIARVIYLLIKIFTTE 137
+LSFLC+ L+IG+I I + FTT+
Sbjct: 304 LLSFLCVSIGGLIIGLICGAISSFVTKFTTD 334
>U53336-10|AAA96182.2| 125|Caenorhabditis elegans Hypothetical
protein K07C11.10 protein.
Length = 125
Score = 29.5 bits (63), Expect = 1.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 120 KIFTTECALYQDSNLRTIFC 179
K+F EC L+QD L IFC
Sbjct: 40 KLFVDECYLFQDETLTPIFC 59
>AF497831-1|AAM18109.1| 783|Caenorhabditis elegans putative Na-H
exchanger isoform 7 protein.
Length = 783
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 45 ILSFLCLIFTALVIGVIARVIYLLIKIFTTE 137
+LSFLC+ L+IG+I I + FTT+
Sbjct: 304 LLSFLCVSIGGLIIGLICGAISSFVTKFTTD 334
>AC025716-22|AAK39613.1| 630|Caenorhabditis elegans Zwilch
(drosophila) homolog protein1 protein.
Length = 630
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +3
Query: 207 LLRFMRNLNCREYY-PRCTFLPITISTVNQKF 299
L R++R LNC E++ P + LP+ IST + KF
Sbjct: 152 LQRYIR-LNCSEHFSPSISTLPVWISTTSSKF 182
>Z93382-2|CAB07612.2| 639|Caenorhabditis elegans Hypothetical
protein F45G2.3 protein.
Length = 639
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +3
Query: 102 VIYLLIKIFTTECALYQDSNLRTIFCIGSGGHTTELLRFMR 224
+IY + T EC++Y+ NL+ F GG + ++F R
Sbjct: 182 MIYFKWQSATGECSVYEKCNLKNCFTGELGGDKFDFVKFRR 222
>Z70034-12|CAA93859.1| 235|Caenorhabditis elegans Hypothetical
protein C18E9.10 protein.
Length = 235
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 PRSRKVNQSYFSSVFSTIYSTL 410
P+ R V SY S++F+T+YS+L
Sbjct: 158 PQRRLVTVSYLSALFATLYSSL 179
>Z68318-9|CAA92698.1| 235|Caenorhabditis elegans Hypothetical
protein C18E9.10 protein.
Length = 235
Score = 27.9 bits (59), Expect = 3.2
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 345 PRSRKVNQSYFSSVFSTIYSTL 410
P+ R V SY S++F+T+YS+L
Sbjct: 158 PQRRLVTVSYLSALFATLYSSL 179
>Z82092-1|CAB05010.1| 196|Caenorhabditis elegans Hypothetical
protein ZK384.1 protein.
Length = 196
Score = 27.5 bits (58), Expect = 4.2
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 221 EEFKLSGILSTVYILADNDINSESKIFEAGNK 316
EEF+++G LST+Y D I++ S++ AG K
Sbjct: 105 EEFQVNGWLSTIY--NDTSISAASQMVWAGTK 134
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -3
Query: 223 LMKRSSSVVWPPEPMQNIVRKFES**SAHSVVKILIN 113
+M S S+ PPEP+Q + +K E S +++ + +N
Sbjct: 278 IMTASESLETPPEPIQKLAQKPEVFKSTQNLIDLNLN 314
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3
Query: 249 PRCTFLPITISTVNQKFLKQGTN 317
P T L +TISTVN KF+ TN
Sbjct: 5 PCLTTLLLTISTVNSKFVTDCTN 27
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,579,068
Number of Sequences: 27780
Number of extensions: 194526
Number of successful extensions: 492
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 491
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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