Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00718X
         (423 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   1.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.3  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    21   4.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   4.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.7  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   5.7  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    21   7.5  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    21   7.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   7.5  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 1.1
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 192 GHTTELLRFMRNLNCREYYPRCTFLPITISTV 287
           G+ ++ LR++  +   +Y P    +PIT++ V
Sbjct: 10  GNISDELRYLEKVRGPKYLPLTLIVPITLTYV 41


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 23  KAISHHGNFIVSMFNIY 73
           K +  HGNFI S+ N Y
Sbjct: 574 KWLDIHGNFIESLGNYY 590


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 36  IMEILSFLCLIFTALVI 86
           I+E LSF  +IFT ++I
Sbjct: 407 IIEWLSFFIVIFTYIII 423


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +3

Query: 102 VIYLLIKIFTTECALYQDSNLRTIFCI 182
           +++ + ++   EC  YQ+ NL  I+ I
Sbjct: 30  IMFSMTQVNKEECDYYQNLNLGEIYYI 56


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 148 IKIRIYEQYFALAPVAIQL 204
           ++ ++YE+ +ALAP    L
Sbjct: 352 VQNKLYEETYALAPAGCDL 370


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 5.7
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +2

Query: 200 N*TTAFHEEFKLSGILSTVYILADN 274
           N T  F  +  +    +T+Y+L+DN
Sbjct: 342 NTTMVFCNDLSIDRSTNTMYVLSDN 366


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 45 ILSFLCLIFTALV 83
          I+S LC+I+ ALV
Sbjct: 5  IVSLLCVIYCALV 17


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding
          protein ASP4 protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 45 ILSFLCLIFTALV 83
          I+S LC+I+ ALV
Sbjct: 5  IVSLLCVIYCALV 17


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 8/36 (22%), Positives = 21/36 (58%)
 Frame = +2

Query: 227 FKLSGILSTVYILADNDINSESKIFEAGNKQSTYLL 334
           F  +GIL T+++      ++++ +  A  ++ +Y+L
Sbjct: 663 FSATGILITLFVCGVFLKHNDTPVVRASGRELSYVL 698


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,148
Number of Sequences: 438
Number of extensions: 3001
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)