Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00717X
(347 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 76 6e-15
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 9e-05
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 33 0.056
Z80221-1|CAB02309.1| 690|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 27 4.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 27 4.9
Z81513-3|CAB04185.3| 476|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical... 26 6.4
Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical pr... 26 8.5
AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein sig... 26 8.5
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 76.2 bits (179), Expect = 6e-15
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = +2
Query: 77 QVHDQQIVGAQQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFGGGKS 253
+V +++ +QMV +V+HPG+PTV K +IREK+AK+YK TPD V FGF++ GGGKS
Sbjct: 11 KVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIGGGKS 69
Score = 50.0 bits (114), Expect = 5e-07
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +1
Query: 223 FQDKLRRWQVNGFALIYDTLDLAKKFXPKHRLARNGLYEK 342
F+ K+ + GFAL+YDT+D AKKF PK+RL R GL K
Sbjct: 60 FESKIGGGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATK 99
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3
Query: 63 TIRTRKFMTNRLLARNR 113
TIRTRK +TN+LL R +
Sbjct: 6 TIRTRKVLTNKLLYRKQ 22
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 42.3 bits (95), Expect = 9e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +2
Query: 113 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 211
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 33.1 bits (72), Expect = 0.056
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 256 GFALIYDTLDLAKKFXPKHRLARNG 330
GF L+YDT D A K+ P+H +G
Sbjct: 54 GFTLVYDTFDFANKYQPEHSSNHDG 78
>Z80221-1|CAB02309.1| 690|Caenorhabditis elegans Hypothetical
protein ZC247.2 protein.
Length = 690
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 56 NSDYSHSQVHDQQIVGAQQMVCDVLHPGKPTVSKTEIREKLAK 184
NS +S+++++ +I+ A+ + V HP KP + ++ L K
Sbjct: 422 NSTFSNTKIYSVEIMDAEVIKVLVSHPSKPNIPVMVLQLVLTK 464
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 297 LLGQIECVVDQSESIDLPPPKFVLKPNTNTTSGVTLYILASFSRIS 160
++ + C++ S + + PP V+ P T TT + + A SR++
Sbjct: 1245 VINSVSCII--STGVTVTPPTTVVVPTTATTLNPAIPMCAQCSRLN 1288
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 297 LLGQIECVVDQSESIDLPPPKFVLKPNTNTTSGVTLYILASFSRIS 160
++ + C++ S + + PP V+ P T TT + + A SR++
Sbjct: 1245 VINSVSCII--STGVTVTPPTTVVVPTTATTLNPAIPMCAQCSRLN 1288
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 297 LLGQIECVVDQSESIDLPPPKFVLKPNTNTTSGVTLYILASFSRIS 160
++ + C++ S + + PP V+ P T TT + + A SR++
Sbjct: 1245 VINSVSCII--STGVTVTPPTTVVVPTTATTLNPAIPMCAQCSRLN 1288
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -3
Query: 297 LLGQIECVVDQSESIDLPPPKFVLKPNTNTTSGVTLYILASFSRIS 160
++ + C++ S + + PP V+ P T TT + + A SR++
Sbjct: 1245 VINSVSCII--STGVTVTPPTTVVVPTTATTLNPAIPMCAQCSRLN 1288
>Z81513-3|CAB04185.3| 476|Caenorhabditis elegans Hypothetical
protein F26D2.3a protein.
Length = 476
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 2 RHVRVDAELLKIIQNE*RNSDY 67
+H + D + L++ +NE RNSDY
Sbjct: 266 KHSKWDLKSLRLFRNESRNSDY 287
>AF016686-13|AAB66233.1| 470|Caenorhabditis elegans Hypothetical
protein R07C3.3 protein.
Length = 470
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +2
Query: 2 RHVRVDAELLKIIQNE*RNSDY 67
+H++ D + LK+ +N+ +NSDY
Sbjct: 261 KHLKWDLKSLKLFRNDSKNSDY 282
>Z81118-3|CAB03325.1| 346|Caenorhabditis elegans Hypothetical
protein T10G3.2 protein.
Length = 346
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 220 RFQDKLRRWQVNGFALIYDTLDLAKKFXPKH 312
RF +K R W G+AL++ + + +F +H
Sbjct: 130 RFYEKSRYWMTLGYALVFACILVYIEFANRH 160
>Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical
protein C16C2.2b protein.
Length = 431
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 178 RQNVQGYSRCSVRIRFQDKLRRW 246
RQN QGY R+RF K + W
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPW 223
>Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical
protein C16C2.2a protein.
Length = 473
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 178 RQNVQGYSRCSVRIRFQDKLRRW 246
RQN QGY R+RF K + W
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPW 223
>AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein
signaling regulator EAT-16 protein.
Length = 103
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 178 RQNVQGYSRCSVRIRFQDKLRRW 246
RQN QGY R+RF K + W
Sbjct: 1 RQNAQGYRCLMDRLRFAIKTKPW 23
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,319,823
Number of Sequences: 27780
Number of extensions: 161938
Number of successful extensions: 495
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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