Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00716
         (670 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF158469-1|ABO84858.1|  343|Homo sapiens C2ORF3 variant 3 protein.     33   1.2  
BC064559-1|AAH64559.1|  781|Homo sapiens chromosome 2 open readi...    33   1.2  
AC005034-1|AAY14973.1|  781|Homo sapiens unknown protein.              33   1.2  
AB026911-1|BAA85386.1|  781|Homo sapiens GCF2 fusion protein pro...    33   1.2  
BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.      31   3.7  
AK022688-1|BAB14180.1|  651|Homo sapiens protein ( Homo sapiens ...    31   3.7  
AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.     31   3.7  
BC142620-1|AAI42621.1|  546|Homo sapiens TBX4 protein protein.         30   8.6  

>EF158469-1|ABO84858.1|  343|Homo sapiens C2ORF3 variant 3 protein.
          Length = 343

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +3

Query: 288 CNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPP--RQSGMQWQDLNRAAEGLFVTID 461
           CN    + KF  WRE  P++Y+    SL   +   P  R   + W  L   + GL     
Sbjct: 27  CNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGL----K 82

Query: 462 EMERWRRNVEE 494
           EM  W ++VEE
Sbjct: 83  EMP-WFKSVEE 92


>BC064559-1|AAH64559.1|  781|Homo sapiens chromosome 2 open reading
           frame 3 protein.
          Length = 781

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +3

Query: 288 CNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPP--RQSGMQWQDLNRAAEGLFVTID 461
           CN    + KF  WRE  P++Y+    SL   +   P  R   + W  L   + GL     
Sbjct: 465 CNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGL----K 520

Query: 462 EMERWRRNVEE 494
           EM  W ++VEE
Sbjct: 521 EMP-WFKSVEE 530


>AC005034-1|AAY14973.1|  781|Homo sapiens unknown protein.
          Length = 781

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +3

Query: 288 CNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPP--RQSGMQWQDLNRAAEGLFVTID 461
           CN    + KF  WRE  P++Y+    SL   +   P  R   + W  L   + GL     
Sbjct: 465 CNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGL----K 520

Query: 462 EMERWRRNVEE 494
           EM  W ++VEE
Sbjct: 521 EMP-WFKSVEE 530


>AB026911-1|BAA85386.1|  781|Homo sapiens GCF2 fusion protein
           protein.
          Length = 781

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
 Frame = +3

Query: 288 CNSLKRVKKFSNWREPIPEAYFPKLDSLTSSRGWPP--RQSGMQWQDLNRAAEGLFVTID 461
           CN    + KF  WRE  P++Y+    SL   +   P  R   + W  L   + GL     
Sbjct: 465 CNIQNILLKFQQWREKFPDSYYEAFISLCIPKLLNPLIRVQLIDWNPLKLESTGL----K 520

Query: 462 EMERWRRNVEE 494
           EM  W ++VEE
Sbjct: 521 EMP-WFKSVEE 530


>BC071589-1|AAH71589.1| 1131|Homo sapiens ADNP homeobox 2 protein.
          Length = 1131

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 518 LPNGQTRPLDIDTLGNMLESSALSPNRELYGS 613
           LP GQT PL + + G ++ S  LSPN+ +  S
Sbjct: 498 LPPGQTAPLRVISAGQVVPSGLLSPNQTVSSS 529


>AK022688-1|BAB14180.1|  651|Homo sapiens protein ( Homo sapiens
           cDNA FLJ12626 fis, clone NT2RM4001810, weakly similar to
           AGGRECAN CORE PROTEIN PRECURSOR. ).
          Length = 651

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 518 LPNGQTRPLDIDTLGNMLESSALSPNRELYGS 613
           LP GQT PL + + G ++ S  LSPN+ +  S
Sbjct: 18  LPPGQTAPLRVISAGQVVPSGLLSPNQTVSSS 49


>AB020670-1|BAA74886.2| 1181|Homo sapiens KIAA0863 protein protein.
          Length = 1181

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = +2

Query: 518 LPNGQTRPLDIDTLGNMLESSALSPNRELYGS 613
           LP GQT PL + + G ++ S  LSPN+ +  S
Sbjct: 548 LPPGQTAPLRVISAGQVVPSGLLSPNQTVSSS 579


>BC142620-1|AAI42621.1|  546|Homo sapiens TBX4 protein protein.
          Length = 546

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 36  SCYSTRRSTHTYYHSTRLHCDGLRRRTPPCVLARRYRHQPASL 164
           S + T+R +  +YH  +   DG R    PC   R Y   P+S+
Sbjct: 322 STFPTQRDSSLFYHCLKRRADGTRHLDLPC--KRSYLEAPSSV 362


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,803,748
Number of Sequences: 237096
Number of extensions: 2438390
Number of successful extensions: 5597
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5580
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)