Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00713
(722 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767... 32 0.40
01_07_0117 + 41171919-41172395 31 1.2
11_01_0545 + 4308167-4308496 30 2.1
10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243 29 3.7
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 3.7
03_05_0832 - 28037047-28037315,28037428-28037530,28037664-280376... 29 3.7
01_01_0795 - 6187518-6188219 29 3.7
07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595 29 4.9
06_03_0720 - 23858394-23858883,23860318-23860727 29 4.9
09_03_0078 + 12137124-12137672 28 6.5
08_02_1518 + 27644404-27645135 28 6.5
07_03_1339 + 25879246-25881154,25881502-25881696,25881777-258819... 28 6.5
07_03_0510 - 18908224-18908247,18909075-18909347 28 6.5
03_03_0252 - 15857907-15858246,15858340-15858608 28 6.5
01_03_0015 + 11669321-11670070 28 6.5
12_02_0478 + 19514509-19514940,19515749-19515820,19515954-195159... 28 8.6
12_01_0587 - 4793571-4793861 28 8.6
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 28 8.6
>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
13676868-13677330,13677855-13678036,13678093-13678235,
13678315-13678423,13679000-13679456,13680490-13682473,
13682507-13682626,13682920-13682971
Length = 1467
Score = 32.3 bits (70), Expect = 0.40
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = -1
Query: 386 QDRSFHAMTGSEHVLPADERPATEQHRPLEPH--ILDDHQPRIRVDDAGAPPTILSPTAM 213
+DRSF A+T EH P + E P E H IL++ + ++D APP+ + +
Sbjct: 1040 EDRSFEAVT-PEHDAPCTDE-KEESQMPAEKHHRILEEVDGELEMEDV-APPSEVEASTR 1096
Query: 212 SRPQ 201
RP+
Sbjct: 1097 CRPE 1100
>01_07_0117 + 41171919-41172395
Length = 158
Score = 30.7 bits (66), Expect = 1.2
Identities = 22/86 (25%), Positives = 38/86 (44%)
Frame = -2
Query: 511 LMPILTNGSVQSVPPADTDTQSRPGFVVLYSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLM 332
+MP+L + S A+ + P SP +P S +APF PAV+
Sbjct: 73 IMPLLPSPGPDSDGSAEAPSDVMPTIPSSPSPPNPDALLPDSALAPFGSAPAVAAQ---S 129
Query: 331 SAPPQSSIVLSSLTYSMTTSQGYESM 254
APP S+ ++ +++ + G +M
Sbjct: 130 RAPPPSTTTAAAAAWALPVAVGLVAM 155
>11_01_0545 + 4308167-4308496
Length = 109
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -3
Query: 495 PMGPCNPCRPLIRTRNHG--PGSSCCTRRD-ALFSACLHPRSLLS 370
P+ C+ IR R+ G PGS+C T +D L+ C H R L S
Sbjct: 63 PVAACDDTGCAIRCRDLGYNPGSACWTSKDIKLYCCCGHGRRLPS 107
>10_08_0421 + 17793875-17794536,17794558-17795515,17795689-17796243
Length = 724
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 488 PIGQDRHEKTIPHPDYQPYHFLRKQDIGLIRLQSIAPFTDFIRPICLPSTDY 643
P DRH I PD P F+ Q + + S + DF +C P DY
Sbjct: 459 PADIDRHTDEIHEPDISPKPFVCSQPCHGLNVGSFSDVLDF---VCNPIMDY 507
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 139 KRVHACQSEMTATPPNPEGKCCGRDIA 219
+++H+C+S M+ +PP + C +D A
Sbjct: 802 RKLHSCKSSMSPSPPKSRNRQCLKDTA 828
>03_05_0832 -
28037047-28037315,28037428-28037530,28037664-28037695,
28037788-28038005,28038145-28038260,28038514-28038757,
28039129-28039216,28039513-28039588,28040126-28040164,
28040347-28040405,28041292-28041529
Length = 493
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 399 PKTVRLGEYNT-TNPGRDCVSVSAGGTDCTDPLV 497
P+ V L Y+ TNP + C +AGG T+P +
Sbjct: 194 PRIVALLGYDQGTNPPKRCTKCAAGGNSATEPYI 227
>01_01_0795 - 6187518-6188219
Length = 233
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -2
Query: 655 RVHCVICTRQAYRPDEICKRCDALQPDQPDVLFPKKMIGLIVGVRY--GLLMPILTNGSV 482
R C +C +A DE+ A PD++ P+ + ++V V G ++ +
Sbjct: 152 RASCPVCRGKAAPADELADAIVARIAVTPDLVGPRVSMSVVVPVEMLKGEMVGASSTSRA 211
Query: 481 QSVPPADTDTQSRPG 437
S PP D ++ PG
Sbjct: 212 ASAPPEQLDARA-PG 225
>07_01_0835 - 6780994-6781677,6784173-6785969,6787362-6787595
Length = 904
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 2/66 (3%)
Frame = -1
Query: 260 VDDAGAPPTILSPTAMSRPQHFPSGL--GGVAVISLWQACTRFGLGVVVTAVYCGAVTQH 87
V DA A P + A+ R H + GG V+S W+ F + +VV V H
Sbjct: 809 VVDAAADPAAQAGVALFRKLHARTTTTEGGAVVVSAWKELADFWVRMVVYLAPSSDVEGH 868
Query: 86 MLCCSD 69
+ +D
Sbjct: 869 AMALAD 874
>06_03_0720 - 23858394-23858883,23860318-23860727
Length = 299
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -1
Query: 320 TEQHRPLEPHILDDHQPRIRVDDAGAPPTILSPTAMSRPQHFPSGLGG 177
TEQ +P++ +I D P I D + +SP + R + S L G
Sbjct: 226 TEQQKPIQAYIRQDKTPDIDFRDRHSYSPTVSPDTVRRDESAISDLAG 273
>09_03_0078 + 12137124-12137672
Length = 182
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +2
Query: 296 AREDDAALWRGAHQREV-RAHCRSLRERSDLGCRHAENSASRR 421
A E+DA+ + R+V A R+LR RSD RH + +RR
Sbjct: 134 AAEEDASSSSSSLARDVWEAQLRTLRARSDERRRHGADGTARR 176
>08_02_1518 + 27644404-27645135
Length = 243
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 713 HCRTASIVPSQPRSERIYLAGSLCNL 636
H R+AS VPS PRS I + G L NL
Sbjct: 4 HLRSAS-VPSSPRSNEIDIEGQLQNL 28
>07_03_1339 +
25879246-25881154,25881502-25881696,25881777-25881928,
25882147-25882607,25883723-25883810,25884066-25884135,
25884288-25884361,25884456-25884524,25884647-25884724,
25884946-25885070,25885168-25885240,25885508-25885566,
25885650-25886027,25886134-25886236,25886332-25886544
Length = 1348
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 302 LEPHILDDHQPRIRVDDAGAPPTILSPTAMSRPQH 198
L +D H+ + +++ PP ++PTA + P H
Sbjct: 779 LVAEFVDPHEVKAKLEPPPPPPAPINPTAATAPSH 813
>07_03_0510 - 18908224-18908247,18909075-18909347
Length = 98
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 189 GREVLRPGHSRRRQNRWWCARIIDS 263
G+E G RR RWW R++D+
Sbjct: 10 GKEEEEGGGEVRRARRWWVGRVVDT 34
>03_03_0252 - 15857907-15858246,15858340-15858608
Length = 202
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = -2
Query: 580 PDQPDVLFPKKMIGLIVGVRYGLLMPILTNGSVQ 479
PD+P +L P + GV G +MPI S+Q
Sbjct: 160 PDEPPMLLPPPQMPAASGVSAGGVMPIARKASLQ 193
>01_03_0015 + 11669321-11670070
Length = 249
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 296 PHILDDHQPRIRVDDAGAPPTILSPTAMSRPQHFPSG 186
P+ D QP +R+D AG P++ + + PSG
Sbjct: 195 PYDADGAQPEVRIDIAGDAPSVAAKGSAPAMGRLPSG 231
>12_02_0478 +
19514509-19514940,19515749-19515820,19515954-19515986,
19516169-19516830,19516905-19517045,19518634-19518830,
19518878-19518965,19518987-19519041,19519501-19519571,
19519709-19519763,19519881-19519896,19520286-19520361,
19521202-19521240,19521312-19521333
Length = 652
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/62 (29%), Positives = 25/62 (40%)
Frame = +2
Query: 305 DDAALWRGAHQREVRAHCRSLRERSDLGCRHAENSASRRVQHDEPGP*LRVRISGRHGLH 484
DD WR Q+ V+ S RS C H ++V+H E G + G+H
Sbjct: 270 DDGYNWRKYGQKVVKG---SDCPRSYYKCTHPNCPVKKKVEHAEDGQISEIIYKGKHNHQ 326
Query: 485 GP 490
P
Sbjct: 327 RP 328
>12_01_0587 - 4793571-4793861
Length = 96
Score = 27.9 bits (59), Expect = 8.6
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = -1
Query: 320 TEQHRPLEPHILDDHQPRIRVDDA-GAPPTILSPTAMSRPQHFPSGLGG 177
TEQ +P++ +I D P I D G PT+ SP + R + S L G
Sbjct: 23 TEQQKPIQANIRQDTPPDIDFRDRHGYSPTV-SPDTVRRDESAISDLTG 70
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -2
Query: 523 RYGLLMPILTNGSVQSVPPADTD 455
+YG+ P +TNGS+Q+ PA+T+
Sbjct: 514 KYGIPEPTVTNGSLQANYPANTN 536
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,551,920
Number of Sequences: 37544
Number of extensions: 579850
Number of successful extensions: 1804
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1803
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1886372480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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