Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00713
         (722 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    35   0.068
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    34   0.089
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    32   0.48 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    31   0.83 
AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical...    31   1.1  
AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical ...    30   1.5  
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    30   1.5  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   3.4  
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    29   4.4  
U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated p...    29   4.4  
D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine recep...    29   4.4  
AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (...    28   5.9  
Z68507-1|CAA92826.1|  337|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ...    28   7.8  

>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 34.7 bits (76), Expect = 0.068
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 267 PWLVVIEY-VRLERTMLLCGGALISGKYVLTAGHC 368
           PW V I    R     ++CGG LI+ K+VLTA HC
Sbjct: 44  PWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHC 78


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 34.3 bits (75), Expect = 0.089
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
 Frame = +2

Query: 533 YQPYHFLRKQDIGLIRLQSIA-PFTDFIRPICLPSTDYTVNPPSKFALTVAGWG 691
           Y  Y  +   DI ++ +      F ++ +PICLPS D+   P  +    V+GWG
Sbjct: 107 YPLYKDIFSHDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQ--CVVSGWG 158


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/36 (47%), Positives = 21/36 (58%)
 Frame = +3

Query: 261 SYPWLVVIEYVRLERTMLLCGGALISGKYVLTAGHC 368
           S+PW V +   RL      CGG+LI   +VLTA HC
Sbjct: 68  SWPWTVQL-LSRLGHHR--CGGSLIDPNFVLTAAHC 100


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 31.1 bits (67), Expect = 0.83
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 551 LRKQDIGLIRLQSIAPFTDFIRPICLPSTDYTVNPPSKFALTVAGWGR 694
           L+  D  ++ ++    F++ +RPICLP  +         +L V GWGR
Sbjct: 140 LKGHDWAIVEVEKRIHFSENVRPICLPRPNMYYTK----SLAVPGWGR 183


>AF016687-11|ABL01528.1|  646|Caenorhabditis elegans Hypothetical
           protein T21D12.7 protein.
          Length = 646

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = +3

Query: 366 CVKGAILDVGTPKTVRLGEYNTTNPGRDCVSVSAGGTDCTDPLVKIGMRRPYLTPTISPI 545
           CV+  + D G+PKT    + NTT P   C     G   C  P + I      + P +  +
Sbjct: 544 CVEALVSDDGSPKTCLGWDDNTTCPQGKCQKAMDGVYYCCRPPMMILQNNAPIVPQVEGV 603


>AL033536-1|CAA22138.1|  908|Caenorhabditis elegans Hypothetical
           protein Y53C10A.4 protein.
          Length = 908

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
 Frame = -2

Query: 496 TNGSVQSVPPADTDTQSRPGFVVLYSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQ 317
           ++ S  S+P   +D   RP F  L     ++   PT ++APF+Q P++ T    ++A  Q
Sbjct: 709 SSSSTSSIP---SDPAPRPYF--LKEEYTSLANKPTVQVAPFSQEPSLKTINDRLNALRQ 763

Query: 316 SSIVLSSLTYS--MTTSQ 269
           +SI+   +     MT+S+
Sbjct: 764 NSILAQEVPQEPVMTSSR 781


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query: 267 PWLVVIE-YVRLERTMLLCGGALISGKYVLTAGHCVKG 377
           PW V    Y + E++   C G ++S +++L A HC  G
Sbjct: 175 PWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHCFAG 212


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +3

Query: 306 TMLLCGGALISGKYVLTAGHCV 371
           T  +CGG LI+   V+T+ HCV
Sbjct: 42  TTNVCGGVLIAPSIVITSAHCV 63


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
 Frame = +3

Query: 255 IDSYPWLVVIE-YVRL----ERTMLLCGGALISGKYVLTAGHC 368
           ID  PW V I  Y  +    E     C G L S +++LTA HC
Sbjct: 49  IDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91


>U64854-6|AAB18318.2| 5079|Caenorhabditis elegans Uncoordinated
            protein 68 protein.
          Length = 5079

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 294  RLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPKTVRLG 419
            R E T  +CGG       +LTAG+ +K   +D+G+   ++LG
Sbjct: 960  RAEATYAVCGGKWYFEFEILTAGY-MKIGWMDIGSTPEIQLG 1000


>D45899-1|BAA08309.1| 5071|Caenorhabditis elegans ryanodine receptor
            protein.
          Length = 5071

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +3

Query: 294  RLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPKTVRLG 419
            R E T  +CGG       +LTAG+ +K   +D+G+   ++LG
Sbjct: 1081 RAEATYAVCGGKWYFEFEILTAGY-MKIGWMDIGSTPEIQLG 1121


>AC024790-2|AAF60638.1|  220|Caenorhabditis elegans Ground-like (grd
           related) protein 5 protein.
          Length = 220

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = -2

Query: 424 YSPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQSSIVLSSLTYS 284
           Y P+++ FG   +  APF   PA    F + SAPPQ  +      Y+
Sbjct: 69  YQPQQSSFGSSYAAPAPFAAQPA---QFAVQSAPPQPIVAPPPQAYA 112


>Z68507-1|CAA92826.1|  337|Caenorhabditis elegans Hypothetical
           protein M18.1 protein.
          Length = 337

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/60 (30%), Positives = 24/60 (40%)
 Frame = +2

Query: 323 RGAHQREVRAHCRSLRERSDLGCRHAENSASRRVQHDEPGP*LRVRISGRHGLHGPIGQD 502
           +G  QR+V        +R    C    NSA+       PGP       G  G HG +G+D
Sbjct: 64  QGGKQRQVYESLFGRTKRQAAQCNCGANSAASNCPAGPPGP---PGAPGEDGDHGLVGED 120


>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
           protein H11E01.3 protein.
          Length = 1464

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 18/71 (25%), Positives = 27/71 (38%), Gaps = 8/71 (11%)
 Frame = -1

Query: 386 QDRSFHAMTGSEHVLPADERPATEQHRPLEPHILD--------DHQPRIRVDDAGAPPTI 231
           Q  S +    SEH+  A + P T Q     PH  +         H P    ++ G  P++
Sbjct: 699 QSPSSNQFHSSEHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSV 758

Query: 230 LSPTAMSRPQH 198
            SP      +H
Sbjct: 759 HSPHVSEHFEH 769


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,489,230
Number of Sequences: 27780
Number of extensions: 425704
Number of successful extensions: 1293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)