Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00713
         (722 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   4e-04
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   6.7  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   6.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 35.9 bits (79), Expect = 4e-04
 Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
 Frame = +3

Query: 255 IDSYPWLVVIEYVRLERTMLLCGGALISGKYVLTAGHCVKGAILDVGTPK-TVRLGEYN 428
           I+ +P +  I+  R     ++CG  +IS +YVLTA HC    I+D  T K  + +GE++
Sbjct: 169 INEFPMMAGIK--RTYEPGMICGATIISKRYVLTAAHC----IIDENTTKLAIVVGEHD 221


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -2

Query: 421 SPRRTVFGVPTSKIAPFTQ*PAVSTYFPLMSAPPQS 314
           SP R   GVPTS I   T   +   Y   +  PP+S
Sbjct: 397 SPPRGPGGVPTSVIQAATSSVSDDLYLLELGFPPRS 432


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 143 RFGLGVVVTAVYCGAVTQ 90
           RFG+GV  +AVY   +T+
Sbjct: 584 RFGVGVSFSAVYGALLTK 601


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +2

Query: 293 EAREDDAALWRGAHQREVRAHCRSLRE 373
           E+RE+ A     A +RE   HC   +E
Sbjct: 762 ESREEKATTSLEAEKREKSEHCEKGKE 788


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 143 RFGLGVVVTAVYCGAVTQ 90
           RFG+GV  +AVY   +T+
Sbjct: 674 RFGVGVSFSAVYGALLTK 691


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -3

Query: 210  PAATLPFRIRGGGSHLALAGVHPLRSGGRGHCRXLWRSNT 91
            P AT      GGGS   L G+  L          L  +NT
Sbjct: 1696 PYATFQLSEGGGGSLAGLGGLGGLGGAAEASAAGLHPNNT 1735


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = -3

Query: 210  PAATLPFRIRGGGSHLALAGVHPLRSGGRGHCRXLWRSNT 91
            P AT      GGGS   L G+  L          L  +NT
Sbjct: 1692 PYATFQLSEGGGGSLAGLGGLGGLGGAAEASAAGLHPNNT 1731


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,319
Number of Sequences: 438
Number of extensions: 5050
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22413960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)