Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00712
         (606 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1460 - 37519393-37519591,37519724-37519746,37519843-37519905     59   2e-09
09_02_0168 - 5253588-5254688                                           41   7e-04
03_02_0188 + 6251256-6251561                                           37   0.011
03_02_0901 + 12267042-12267182,12267949-12268095,12268163-122682...    28   6.6  
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813...    27   8.7  

>01_06_1460 - 37519393-37519591,37519724-37519746,37519843-37519905
          Length = 94

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 28/66 (42%), Positives = 41/66 (62%)
 Frame = +3

Query: 312 MVYTEKYLKEKLTQELDAVHVEVTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQ 491
           M  T++ ++  +T  L    + VTD S GCGA + + +VS+KF+GK LL RHR+VNT L 
Sbjct: 1   MGVTKEDVEAAITSSLSPSSLVVTDTSGGCGASYEIEVVSEKFEGKRLLERHRMVNTALA 60

Query: 492 EELKTI 509
             +  I
Sbjct: 61  PHMAEI 66


>09_02_0168 - 5253588-5254688
          Length = 366

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +3

Query: 411 FSVLIVSDKFKGKPLLARHRLVNTLLQEELK 503
           F+V +VS+ F+GK LL RHR V  LLQ+ELK
Sbjct: 320 FNVRVVSEAFQGKSLLKRHRAVYDLLQDELK 350


>03_02_0188 + 6251256-6251561
          Length = 101

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 18/48 (37%), Positives = 30/48 (62%)
 Frame = +3

Query: 363 AVHVEVTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKT 506
           A H  V D ++     F++ ++S KF+G+ L+ RHR+V  LL +EL +
Sbjct: 39  AGHAAVKDNANE--THFNIRVISPKFEGQSLVKRHRMVYDLLTDELNS 84


>03_02_0901 +
           12267042-12267182,12267949-12268095,12268163-12268253,
           12268367-12268485,12268779-12268969,12269440-12269650,
           12270072-12270309,12270944-12271329,12271933-12271956,
           12271984-12272077,12272341-12272525,12273025-12273255,
           12273665-12273730,12273816-12274034,12274764-12275003,
           12275244-12275423,12276269-12276535,12276612-12276815,
           12276896-12277048
          Length = 1128

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/69 (26%), Positives = 32/69 (46%)
 Frame = +3

Query: 366 VHVEVTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTITRSPRKP*LLIS 545
           +HV + D S G    F V++     +G P + +  L+  L++   K      R P  ++S
Sbjct: 72  LHVPIMDRSIGEPPPFVVVV-----QGPPQVGKSLLIKCLVKHYTKQNLSEVRGPITVVS 126

Query: 546 GRHNNVYYL 572
           G+   V +L
Sbjct: 127 GKSRRVQFL 135


>03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,
            8136560-8136655,8136746-8136874,8136947-8137123,
            8137256-8137366,8138592-8138792,8139022-8139186,
            8139293-8139527,8139618-8139745,8139833-8139928,
            8140017-8140112,8140252-8140325,8140393-8140462,
            8140556-8140665,8140753-8140906,8141040-8141155,
            8141259-8141379,8141464-8141641,8142331-8142489,
            8142619-8142732,8142821-8143000,8143098-8143177
          Length = 1117

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 157  HESEIAVAELTNFTPDKQW 101
            HE++IA+ E T   P KQW
Sbjct: 976  HETQIAIYETTKLEPVKQW 994


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,034,746
Number of Sequences: 37544
Number of extensions: 248687
Number of successful extensions: 511
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)