Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00708
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    25   0.35 
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    25   0.35 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    25   0.35 
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   2.5  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   2.5  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   5.7  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    21   9.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 397 RISSKGDSTLAQGNNIHG 450
           ++S K  S+L  GNNIHG
Sbjct: 221 KLSPKSASSLPPGNNIHG 238


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 397 RISSKGDSTLAQGNNIHG 450
           ++S K  S+L  GNNIHG
Sbjct: 169 KLSPKSASSLPPGNNIHG 186


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 397 RISSKGDSTLAQGNNIHG 450
           ++S K  S+L  GNNIHG
Sbjct: 352 KLSPKSASSLPPGNNIHG 369


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 247 NWKCE***KDLLYFRERCSCKQVYKCTKRQGFIKLC 354
           N+KC     D  ++    SC + +KC      +K C
Sbjct: 22  NFKCP---DDFGFYPHHTSCDKYWKCDNNVAELKTC 54


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +1

Query: 247 NWKCE***KDLLYFRERCSCKQVYKCTKRQGFIKLC 354
           N+KC     D  ++    SC + +KC      +K C
Sbjct: 22  NFKCP---DDFGFYPHHTSCDKYWKCDNNVAELKTC 54


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   GGLFSLLCPFIF*N 43
           GGL +L+ PF+F N
Sbjct: 124 GGLGTLIAPFLFSN 137


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +1

Query: 283 YFRERCSCKQVYKCTKRQGFIKLC 354
           +F +   C + Y+C   Q   KLC
Sbjct: 45  FFADAEQCDKYYECNDGQITEKLC 68


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +1

Query: 280  LYFRERCSCKQVYKCTKRQGFIKLC 354
            L+  +  +C Q Y C + Q  +++C
Sbjct: 2241 LFVADDTNCAQYYLCNQGQLQLQVC 2265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,979
Number of Sequences: 336
Number of extensions: 2371
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)