Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00708
         (575 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    27   0.44 
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   1.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   3.1  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   5.4  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   9.4  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   9.4  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 27.1 bits (57), Expect = 0.44
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 LLYFRERCSCKQVYKCTKRQGFIKLC 354
           ++Y   R   ++  K +KRQ F+KLC
Sbjct: 312 IVYIAARSELQRAIKASKRQHFLKLC 337


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
 Frame = +3

Query: 150 RERNSKREIKLLNMLLFIKST--LWK 221
           RERN+ +    LN+LL IK+T  LW+
Sbjct: 259 RERNNVKRNDFLNLLLQIKNTGKLWE 284


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 39  EIVQYSQNRSHSIQDLQFKLSEIGQDVGTRLLDLYFVRERN 161
           E++Q + NRS S QDL      + +     +++L+ V   N
Sbjct: 2   EVLQINVNRSRSAQDLALNTMRVERADVCLMVELHSVPRNN 42


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 12/49 (24%), Positives = 26/49 (53%)
 Frame = +3

Query: 66   SHSIQDLQFKLSEIGQDVGTRLLDLYFVRERNSKREIKLLNMLLFIKST 212
            S+ + DLQ+++S + + +     +L  + E   KRE  L+ + +  + T
Sbjct: 1062 SYKLPDLQYQISILEEKLNANKPNLSVIDEFLKKREAYLMRVAVLEEIT 1110


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 201 IKSTLWKVLFGKEADKL 251
           I+S  W+ +FG+E  KL
Sbjct: 477 IRSLCWETMFGQELAKL 493


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 36  SEIVQYSQNRSHSIQDLQFKLSEIGQDV 119
           SEI +  Q R   IQD++  ++ +  DV
Sbjct: 761 SEIERRMQQRDMKIQDIKESMNNVEDDV 788


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,318
Number of Sequences: 2352
Number of extensions: 10451
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)