Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00708
         (575 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042161-1|AAH42161.1|  188|Homo sapiens trafficking protein par...   124   3e-28

>BC042161-1|AAH42161.1|  188|Homo sapiens trafficking protein
           particle complex 5 protein.
          Length = 188

 Score =  124 bits (298), Expect = 3e-28
 Identities = 52/76 (68%), Positives = 65/76 (85%)
 Frame = +2

Query: 257 ANDDERTYYIFEKDALVNKFISVPKDKGSLNCAIFNAGIIEAVLTRSGFPAKVTAHWHKG 436
           ANDD RT+YI E++ L+N +ISVPK+  +LNCA F AGI+EAVLT SGFPAKVTAHWHKG
Sbjct: 108 ANDDARTFYIIEREPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWHKG 167

Query: 437 TTYMVKFDDSVITRDK 484
           TT M+KF+++VI RD+
Sbjct: 168 TTLMIKFEEAVIARDR 183



 Score =  101 bits (241), Expect = 2e-21
 Identities = 46/84 (54%), Positives = 64/84 (76%)
 Frame = +3

Query: 3   EVSLAFYALLFSEIVQYSQNRSHSIQDLQFKLSEIGQDVGTRLLDLYFVRERNSKREIKL 182
           EVSL+ +ALLFSE+VQ+ Q+R  S+ +LQ +L+ +G+ VG R+LD    RE+ ++RE K+
Sbjct: 23  EVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDALVAREKGARRETKV 82

Query: 183 LNMLLFIKSTLWKVLFGKEADKLE 254
           L  LLF+K  +WK LFGKEADKLE
Sbjct: 83  LGALLFVKGAVWKALFGKEADKLE 106


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,659,552
Number of Sequences: 237096
Number of extensions: 1319158
Number of successful extensions: 2498
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2498
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)