Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00703
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 108 4e-24
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 108 4e-24
AC024792-6|AAF60686.2| 901|Caenorhabditis elegans Hypothetical ... 35 0.060
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 33 0.24
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF014939-7|AAB63929.2| 343|Caenorhabditis elegans Serpentine re... 29 3.0
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 29 4.0
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 6.9
AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical ... 28 9.1
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 108 bits (260), Expect = 4e-24
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Frame = +2
Query: 8 VQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMADP*RADP----SLPEDGAGGG 175
V +EY G C+++ +CTE M+ FP RM DWLF +M+++ L +
Sbjct: 127 VHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRRELHKLEWEELLSEAENDD 186
Query: 176 IKPHASLGQCRYMEMVRSGRSDQ**ILSRHELFPIRAPLMALEHCIAPFLDRCDADDDHR 355
K H ++ E+ +S HEL PI AP++ +E CI PFL+ CDA++D
Sbjct: 187 EKKHVYPVIWKFCELDTKPHDKS---VSHHELIPITAPVIPMESCIKPFLEGCDANNDGN 243
Query: 356 VTLAEWGKCLELDELEMEERC 418
+++ EWGKCL L E E++ERC
Sbjct: 244 ISIKEWGKCLGLKEGEIQERC 264
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 129 RRELTPHYLKMER---EAESNLTRRWANAAIWKWCDLDAQTNDR 251
RREL H L+ E EAE++ ++ IWK+C+LD + +D+
Sbjct: 167 RREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDK 208
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 108 bits (260), Expect = 4e-24
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 4/141 (2%)
Frame = +2
Query: 8 VQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMADP*RADP----SLPEDGAGGG 175
V +EY G C+++ +CTE M+ FP RM DWLF +M+++ L +
Sbjct: 127 VHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRRELHKLEWEELLSEAENDD 186
Query: 176 IKPHASLGQCRYMEMVRSGRSDQ**ILSRHELFPIRAPLMALEHCIAPFLDRCDADDDHR 355
K H ++ E+ +S HEL PI AP++ +E CI PFL+ CDA++D
Sbjct: 187 EKKHVYPVIWKFCELDTKPHDKS---VSHHELIPITAPVIPMESCIKPFLEGCDANNDGN 243
Query: 356 VTLAEWGKCLELDELEMEERC 418
+++ EWGKCL L E E++ERC
Sbjct: 244 ISIKEWGKCLGLKEGEIQERC 264
Score = 31.1 bits (67), Expect = 0.98
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +3
Query: 129 RRELTPHYLKMER---EAESNLTRRWANAAIWKWCDLDAQTNDR 251
RREL H L+ E EAE++ ++ IWK+C+LD + +D+
Sbjct: 167 RREL--HKLEWEELLSEAENDDEKKHVYPVIWKFCELDTKPHDK 208
>AC024792-6|AAF60686.2| 901|Caenorhabditis elegans Hypothetical
protein Y48G1A.1 protein.
Length = 901
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 803 NFFNLFVSCEYFNDKFFF*LVL*SIFTFNFHYTIFYSKDKVIIKSLLQNR 654
NF++ + E FND + + FT F Y +FYS ++ +++ LLQ +
Sbjct: 533 NFYDYHLMDEMFNDSMHILMETITEFTLPFLYELFYSFEEKVLEGLLQRK 582
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 33.1 bits (72), Expect = 0.24
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Frame = +2
Query: 140 DPSLPEDGAGGGIKPHASLGQCRYMEMVRSGRSDQ**ILSRHELFPIRAPLMALEHCIAP 319
D E GA +K H+ + M +Q LS+ EL PI E C+
Sbjct: 58 DVHAQESGADHTLKLHSVPCRVEVGWMFNQWDGNQDGKLSKAELRPIERG--GNEACVEE 115
Query: 320 FLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 451
F+D C D D +++ EW C D+L E C + + +L
Sbjct: 116 FIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 161
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Frame = +2
Query: 251 ILSRHELFPIRAPLMA---LEHCIAPFLDRCDADDDHRVTLAEWGKCL 385
+L R E P ++ L+ + C CD + D ++T EW KC+
Sbjct: 188 VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKCI 235
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 31.1 bits (67), Expect = 0.98
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -1
Query: 809 KKNFFNLFVSCEYFNDK-FFF*LVL*SIFTFNFHY 708
++NFF L + C Y N K FF+ ++ +F+FN +Y
Sbjct: 384 QENFFVLHLFCFYHNIKYFFYYIIFMLLFSFNLNY 418
>AF014939-7|AAB63929.2| 343|Caenorhabditis elegans Serpentine
receptor, class h protein192 protein.
Length = 343
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 811 EKKIFLTYLFHVSILMINFFFNLCCNQFSHLIS 713
+KK +T L VSI MI F F L F++LI+
Sbjct: 240 QKKFIITLLIQVSIPMICFIFTLIYIGFAYLIN 272
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +2
Query: 302 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 451
E C+ F+D C D D +++ EW C D+L E C + + +L
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 169
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 386 ELDELEMEERCDDFNENAE 442
E+++LE E RC NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211
>AF100657-2|AAC68958.2| 1635|Caenorhabditis elegans Hypothetical
protein F52C12.4 protein.
Length = 1635
Score = 27.9 bits (59), Expect = 9.1
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = -1
Query: 809 KKNFFNLFVSCEYFNDKFFF*LVL*SIFTFNFHYTIFYSKDKVIIKSLLQNRLKCAFSTY 630
KKNF N +S + N K L++ F+ Y F +K V K L+NR K F
Sbjct: 726 KKNFENSKISPKRGNSKAADTLLV--FGKFSEKYIFFITKTSVNSKKWLKNRRKHVFCDE 783
Query: 629 EYNII 615
NI+
Sbjct: 784 NLNIL 788
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,163,018
Number of Sequences: 27780
Number of extensions: 337229
Number of successful extensions: 878
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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