Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00702
(686 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 81 1e-15
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 81 1e-15
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 31 1.0
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 29 3.1
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 28 5.4
U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical pr... 27 9.5
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 VQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAARRELTPHYLKMER---EAES 178
V +EY G C+++ +CTE M+ FP RM DWLF +M+++ RREL H L+ E EAE+
Sbjct: 127 VHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL--HKLEWEELLSEAEN 184
Query: 179 NLTRRWANAAIWKWCDLDAQTNDR 250
+ ++ IWK+C+LD + +D+
Sbjct: 185 DDEKKHVYPVIWKFCELDTKPHDK 208
Score = 75.4 bits (177), Expect = 4e-14
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +1
Query: 256 SRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLELDELEMEERC 417
S HEL PI AP++ +E CI PFL+ CDA++D +++ EWGKCL L E E++ERC
Sbjct: 211 SHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 80.6 bits (190), Expect = 1e-15
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 3/84 (3%)
Frame = +2
Query: 8 VQIEYYGTCREMPDCTESEMSDFPRRMRDWLFNIMRDMAARRELTPHYLKMER---EAES 178
V +EY G C+++ +CTE M+ FP RM DWLF +M+++ RREL H L+ E EAE+
Sbjct: 127 VHLEYLGECKKLDECTEEHMAQFPERMADWLFQVMKELKKRREL--HKLEWEELLSEAEN 184
Query: 179 NLTRRWANAAIWKWCDLDAQTNDR 250
+ ++ IWK+C+LD + +D+
Sbjct: 185 DDEKKHVYPVIWKFCELDTKPHDK 208
Score = 75.4 bits (177), Expect = 4e-14
Identities = 30/54 (55%), Positives = 41/54 (75%)
Frame = +1
Query: 256 SRHELFPIRAPLMALEHCIAPFLDRCDADDDHRVTLAEWGKCLELDELEMEERC 417
S HEL PI AP++ +E CI PFL+ CDA++D +++ EWGKCL L E E++ERC
Sbjct: 211 SHHELIPITAPVIPMESCIKPFLEGCDANNDGNISIKEWGKCLGLKEGEIQERC 264
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Frame = +1
Query: 139 DPSLPEDGAGGGIKPHASLGQCRYMEMVRSGRSDQ**IRSRHELFPIRAPLMALEHCIAP 318
D E GA +K H+ + M +Q S+ EL PI E C+
Sbjct: 58 DVHAQESGADHTLKLHSVPCRVEVGWMFNQWDGNQDGKLSKAELRPIERG--GNEACVEE 115
Query: 319 FLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 450
F+D C D D +++ EW C D+L E C + + +L
Sbjct: 116 FIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 161
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Frame = +1
Query: 250 IRSRHELFPIRAPLMA---LEHCIAPFLDRCDADDDHRVTLAEWGKCL 384
+ R E P ++ L+ + C CD + D ++T EW KC+
Sbjct: 188 VLERSEWKPFKSVLLEWKNVRQCSRNLFKTCDLNKDRKLTFDEWRKCI 235
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = +1
Query: 301 EHCIAPFLDRC-DADDDHRVTLAEWGKCLEL-DELEMEERCDDFNENAEHYL 450
E C+ F+D C D D +++ EW C D+L E C + + +L
Sbjct: 118 EACVEEFIDMCDDMVVDGSISVDEWCDCFTFSDDLRHEPPCHKAKHDVDPHL 169
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 385 ELDELEMEERCDDFNENAE 441
E+++LE E RC NENAE
Sbjct: 193 EIEKLETEMRCQKMNENAE 211
>U40933-9|ABD63229.1| 867|Caenorhabditis elegans Hypothetical
protein F20D12.1b protein.
Length = 867
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 268 ARDGTESIIGLSVQIAPFPYSGIG 197
AR+G S +GLS A PYS IG
Sbjct: 615 AREGNPSTVGLSCNSAENPYSFIG 638
>U40933-8|AAA81677.1| 1030|Caenorhabditis elegans Hypothetical
protein F20D12.1a protein.
Length = 1030
Score = 27.5 bits (58), Expect = 9.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -2
Query: 268 ARDGTESIIGLSVQIAPFPYSGIG 197
AR+G S +GLS A PYS IG
Sbjct: 778 AREGNPSTVGLSCNSAENPYSFIG 801
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,357,309
Number of Sequences: 27780
Number of extensions: 277107
Number of successful extensions: 656
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1571291122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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