Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00696
         (352 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-13|CAD21665.1|  117|Caenorhabditis elegans Hypothetical...   149   7e-37
U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical pr...    29   0.94 
U97001-4|AAM45354.1|   86|Caenorhabditis elegans Hypothetical pr...    27   5.0  
U97001-3|AAB52258.2|  449|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical ...    27   5.0  
AC006656-1|AAF39881.1|  592|Caenorhabditis elegans Hypothetical ...    27   5.0  
U40029-1|AAA81123.3|  360|Caenorhabditis elegans Serpentine rece...    26   8.7  

>AL132876-13|CAD21665.1|  117|Caenorhabditis elegans Hypothetical
           protein Y105E8A.16 protein.
          Length = 117

 Score =  149 bits (360), Expect = 7e-37
 Identities = 65/84 (77%), Positives = 79/84 (94%)
 Frame = +2

Query: 2   RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 181
           RIR+TLTS+NV+ LEKVCA LI+GAK + L VKGP+RMPTK+LRITTRKTPCGEGSKTWD
Sbjct: 18  RIRLTLTSQNVKPLEKVCAQLIDGAKNEHLIVKGPIRMPTKVLRITTRKTPCGEGSKTWD 77

Query: 182 RFQMRIHKRVIDLHSPSEIVKQIT 253
           RFQMRIHKR+I+LH+P+E+++QIT
Sbjct: 78  RFQMRIHKRLINLHAPAEVLRQIT 101



 Score = 27.1 bits (57), Expect = 3.8
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +1

Query: 256 INIEPGVEVEVTIAD 300
           I+IEPGV++EVT AD
Sbjct: 103 ISIEPGVDIEVTRAD 117


>U67947-1|AAB07557.2| 1147|Caenorhabditis elegans Hypothetical
           protein H03E18.1 protein.
          Length = 1147

 Score = 29.1 bits (62), Expect = 0.94
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = +2

Query: 41  LEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGE 163
           +E V A  + G KK+  + K   + PTK    +T++ P  E
Sbjct: 359 VELVTAKTVEGEKKETKKPKSTTKKPTKTAAASTKRPPTTE 399


>U97001-4|AAM45354.1|   86|Caenorhabditis elegans Hypothetical
           protein K08B12.2b protein.
          Length = 86

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 236 FQRESVGRSLSCGFASENDPRSLNLHHKEFYG 141
           FQRE +   L+CG AS +  R+L     E +G
Sbjct: 37  FQREQLNGGLTCGGASRSSNRTLFCRKCEGHG 68


>U97001-3|AAB52258.2|  449|Caenorhabditis elegans Hypothetical
           protein K08B12.2a protein.
          Length = 449

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 236 FQRESVGRSLSCGFASENDPRSLNLHHKEFYG 141
           FQRE +   L+CG AS +  R+L     E +G
Sbjct: 37  FQREQLNGGLTCGGASRSSNRTLFCRKCEGHG 68


>AC006834-8|AAF40006.1|  865|Caenorhabditis elegans Hypothetical
           protein ZK973.2 protein.
          Length = 865

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -2

Query: 309 CLRVGDGHLNLYTGLDVN*VICF 241
           C RV D  LN+Y  LDV  ++CF
Sbjct: 632 CKRVRD-QLNIYRELDVGPIVCF 653


>AC006656-1|AAF39881.1|  592|Caenorhabditis elegans Hypothetical
           protein H12I13.1 protein.
          Length = 592

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 26  RNVRSLEKVC-ADLINGAKKQKLRVKGPVRMPTKILRITTRKT 151
           R+ +S  KVC   L  GAKK++        +  KIL IT  KT
Sbjct: 364 RDNKSSNKVCRTSLSGGAKKKRKERNARSEVGDKILGITETKT 406


>U40029-1|AAA81123.3|  360|Caenorhabditis elegans Serpentine
           receptor, class e (epsilon)protein 39 protein.
          Length = 360

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = -3

Query: 212 SLSCGFASENDPRSLNLHHKEFYGW*YAGSWLACGLGPLHAASVSWL 72
           SL+  F ++ + RSL L  K      +A   + CG+G L  A++ W+
Sbjct: 235 SLAIRFQAKENARSLQLAKKVVL---FAAFAILCGMGLLILAAMHWI 278


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,583,806
Number of Sequences: 27780
Number of extensions: 148176
Number of successful extensions: 263
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 263
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)