Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00693
         (666 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   6.5  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   8.7  
AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450 CY...    23   8.7  

>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -2

Query: 359 EYVGESVWAMSSKAFDMTYASVLC 288
           +++GE  + +S    D+ Y+  LC
Sbjct: 429 KFIGEQEFELSKHVLDVIYSQTLC 452


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 13/50 (26%), Positives = 25/50 (50%)
 Frame = +1

Query: 217  SNATSRDASPERITNVQERQEGQGHNTDAYVISNAFEDIAQTLSPTYSGQ 366
            SN + ++ SP+ I + Q RQ      +D +V  N    +  + SP+ + +
Sbjct: 2087 SNISPKE-SPDSIGDPQGRQTAVLVESDGFVTKNGHRVVIHSRSPSITSR 2135


>AF487781-1|AAL96668.1|  533|Anopheles gambiae cytochrome P450
           CYP9L1 protein protein.
          Length = 533

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 6/20 (30%), Positives = 16/20 (80%)
 Frame = +1

Query: 322 FEDIAQTLSPTYSGQRLKRL 381
           + ++  TLSPT++G +++++
Sbjct: 133 WRNVRTTLSPTFTGSKMRQM 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 748,292
Number of Sequences: 2352
Number of extensions: 15364
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)