BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00692
(783 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3423|AAF56214.2| 1564|Drosophila melanogaster CG31140-P... 31 2.3
AE014297-4594|AAF57047.2| 250|Drosophila melanogaster CG15538-P... 30 3.1
>AE014297-3423|AAF56214.2| 1564|Drosophila melanogaster CG31140-PA,
isoform A protein.
Length = 1564
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 551 IAGDLSRWIRGGKTLNWTENKFRRKRSAYISEEKMNG 661
+ G L R +R G ++ W + +++++R+ ISEE +G
Sbjct: 713 VLGRLLRQVRQGLSVGWRKPRYQKRRARSISEEFSSG 749
>AE014297-4594|AAF57047.2| 250|Drosophila melanogaster CG15538-PA
protein.
Length = 250
Score = 30.3 bits (65), Expect = 3.1
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +2
Query: 17 KPSPERQSTRHLLWADESSVELAGMKIMYNHTLK 118
+P ER+ +HL W D+ +V LA K + HTL+
Sbjct: 95 RPDDERKDLKHLTWFDQLAVSLA--KGLTTHTLQ 126
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,371,424
Number of Sequences: 53049
Number of extensions: 644017
Number of successful extensions: 1296
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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