Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00690X
(515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 75 4e-14
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 75 4e-14
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 35 0.030
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 35 0.030
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 35 0.030
AC024796-9|AAK29893.2| 454|Caenorhabditis elegans Hypothetical ... 33 0.12
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 31 0.65
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 1.5
U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 29 2.6
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 29 2.6
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 29 2.6
AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical... 29 2.6
AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical... 29 2.6
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical pr... 28 4.6
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 28 4.6
AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical ... 27 6.0
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 8.0
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 8.0
Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z37140-3|CAA85500.1| 189|Caenorhabditis elegans Hypothetical pr... 27 8.0
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 8.0
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 8.0
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 27 8.0
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 27 8.0
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 27 8.0
AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical ... 27 8.0
AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein. 27 8.0
AC024757-5|AAK68430.1| 814|Caenorhabditis elegans Hypothetical ... 27 8.0
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 74.5 bits (175), Expect = 4e-14
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = +2
Query: 107 KENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIA 256
++ R+LER+IE+E+ DDY+LDLKK+Y DE+YD++PEIWEGHN+A
Sbjct: 439 RDENTRRLEREIELEMQDDYILDLKKHYMLKNPDEKYDIVPEIWEGHNLA 488
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 2 ILNRLHVAVPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERD 139
+LNR+ VA PAPRD+K R P +PP LA K Q + + + +E D
Sbjct: 361 VLNRVFVAYPAPRDEKVRAPFVPPG-LAAKRAQKKLQEAQELMETD 405
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 74.5 bits (175), Expect = 4e-14
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = +2
Query: 107 KENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIA 256
++ R+LER+IE+E+ DDY+LDLKK+Y DE+YD++PEIWEGHN+A
Sbjct: 439 RDENTRRLEREIELEMQDDYILDLKKHYMLKNPDEKYDIVPEIWEGHNLA 488
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2
Query: 2 ILNRLHVAVPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERD 139
+LNR+ VA PAPRD+K R P +PP LA K Q + + + +E D
Sbjct: 361 VLNRVFVAYPAPRDEKVRAPFVPPG-LAAKRAQKKLQEAQELMETD 405
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 35.1 bits (77), Expect = 0.030
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 20 VAVPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLD-LKKNYTE 196
VA AP+ +KP+ P + A+ E KE + + +D+ +VLD K++Y+
Sbjct: 173 VAKSAPKAEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMP---KGTFVLDNFKRSYSN 229
Query: 197 IPEDERYDVIPEIWE 241
ED IP WE
Sbjct: 230 --EDTATKAIPHFWE 242
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 35.1 bits (77), Expect = 0.030
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 20 VAVPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLD-LKKNYTE 196
VA AP+ +KP+ P + A+ E KE + + +D+ +VLD K++Y+
Sbjct: 181 VAKSAPKAEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMP---KGTFVLDNFKRSYSN 237
Query: 197 IPEDERYDVIPEIWE 241
ED IP WE
Sbjct: 238 --EDTATKAIPHFWE 250
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.030
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +2
Query: 20 VAVPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLD-LKKNYTE 196
VA AP+ +KP+ P + A+ E KE + + +D+ +VLD K++Y+
Sbjct: 206 VAKSAPKAEKPKKEAKPAAAAAQPEDDEPKEEKSKDPFQDMP---KGTFVLDNFKRSYSN 262
Query: 197 IPEDERYDVIPEIWE 241
ED IP WE
Sbjct: 263 --EDTATKAIPHFWE 275
>AC024796-9|AAK29893.2| 454|Caenorhabditis elegans Hypothetical
protein Y48G1C.1 protein.
Length = 454
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +2
Query: 26 VPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPE 205
VP + K PPV ++ K K+ + + RK+ +V G + +++ + +E+ E
Sbjct: 29 VPVQNNQKEHPPVQEIKTVSSKSKE-HRVSSSRKIPDHFDV--GPRFYMNVPADGSEVFE 85
Query: 206 DERYDVIPEIW 238
D+ DV E W
Sbjct: 86 DDEKDVENECW 96
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 30.7 bits (66), Expect = 0.65
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +2
Query: 56 PPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPE--DERYD 220
PP P + + +E+Q E +RKRKLE+ I+ E D+ +LD ++ E E DE Y+
Sbjct: 1015 PPPPPKNEVRVQEEQLEG-SRKRKLEQ-IQEEDEDEEILDEEEELFEEEEEVDEEYE 1069
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +2
Query: 41 DDKPRPPVL-----PPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPE 205
+ K +PP+L S A ++++ KR LE D + ++GDD + K E E
Sbjct: 72 EKKEKPPILNYLDDSDSDSADFSSSSKRKRSKRALENDSDEDVGDDGKEEEMKKKKEKEE 131
Query: 206 DER 214
+ER
Sbjct: 132 EER 134
Score = 27.1 bits (57), Expect = 8.0
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
Frame = +2
Query: 83 AKKEKQAEK--ENRKRKLERDIEVELGDDYVLDL--KKNYTEIPEDERYDVIPEIWEGHN 250
AKKEKQ +K E R RK E + ++ K+ EI D D P + E N
Sbjct: 143 AKKEKQRQKELEERNRKAEEAASKRRKREAEVEAERKRKRKEISVDSDDDDKPALLEKRN 202
Query: 251 IATISTRTSLINWQ 292
ST+ S ++Q
Sbjct: 203 RRDSSTQPSSSSFQ 216
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 56 PPVLPPSVLAKKEKQAEKE-NRKRKLERDIEVEL 154
P L P + KKEK+ EKE R+++ +D E ++
Sbjct: 418 PEPLDPEAIKKKEKEKEKEAEREKEKAKDREKKI 451
>U56963-8|AAB38121.1| 155|Caenorhabditis elegans Hypothetical
protein T13A10.1 protein.
Length = 155
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 50 PRPPVLPPSVLAKKEKQAEKENRKRKLERDIE 145
P PP PP K EK+ E + K K++ +++
Sbjct: 51 PAPPPPPPEAEKKPEKEEEPKKEKSKMKSEVK 82
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 77 VLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKK 184
++ + K+ EKEN++ +R + E DD++L+++K
Sbjct: 901 IMDRNVKETEKENKRLLRKRTEDKERMDDFMLNIRK 936
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 28.7 bits (61), Expect = 2.6
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +2
Query: 77 VLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKK 184
++ + K+ EKEN++ +R + E DD++L+++K
Sbjct: 901 IMDRNVKETEKENKRLLRKRTEDKERMDDFMLNIRK 936
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 83 AKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDERYDVIPEIWEGHNIATI 262
A++E + E+E + ++E + E D ++ E ++E ++I + E H+
Sbjct: 1421 AEEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEEDESDDEENIELIEKSEEDHSRLVR 1480
Query: 263 STRTSLINW 289
S S INW
Sbjct: 1481 SDPNSAINW 1489
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily assigned
gene nameprotein 177 protein.
Length = 1667
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/50 (28%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Frame = +2
Query: 80 LAKKEKQAEKENRKRKLERDIEVELGDDYVL--DLKKNYTEIPEDERYDV 223
+ KK+K+ EKEN+K K +++I+ E +++ +LK++ I + + +++
Sbjct: 997 VTKKKKKKEKENKKNKGKKEIKREEKVEFICVPELKESLENIVKIQDFEL 1046
>AL023828-21|CAA19466.1| 381|Caenorhabditis elegans Hypothetical
protein Y17G7B.18b protein.
Length = 381
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 32 APRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLER-DIEVELGD-DYVLDLKKNYTEIPE 205
+PR D RPP L KE+++ ENRK+K E + + G+ D ++ N E
Sbjct: 87 SPRKDSRRPPQL------SKEEKSAAENRKQKTEYFNKKYRYGNFDRYYGIRLNPGE--S 138
Query: 206 DERYDVIPEIWEGHNIA 256
D+R V + W H A
Sbjct: 139 DKRLSVFQKDWFEHKQA 155
>AL023828-20|CAA19465.1| 378|Caenorhabditis elegans Hypothetical
protein Y17G7B.18a protein.
Length = 378
Score = 28.7 bits (61), Expect = 2.6
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 32 APRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLER-DIEVELGD-DYVLDLKKNYTEIPE 205
+PR D RPP L KE+++ ENRK+K E + + G+ D ++ N E
Sbjct: 84 SPRKDSRRPPQL------SKEEKSAAENRKQKTEYFNKKYRYGNFDRYYGIRLNPGE--S 135
Query: 206 DERYDVIPEIWEGHNIA 256
D+R V + W H A
Sbjct: 136 DKRLSVFQKDWFEHKQA 152
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 86 KKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDER 214
K++K+ EKENRK K E D + + DD KK ++ E +
Sbjct: 174 KEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSKGAEKSK 216
>Z68315-6|CAA92671.1| 219|Caenorhabditis elegans Hypothetical
protein F28C6.5 protein.
Length = 219
Score = 27.9 bits (59), Expect = 4.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 20 VAVPAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLE 133
VAVP + P+ PP ++ E AE+ +K+ LE
Sbjct: 90 VAVPLDEEALHGEPLFPPELILPSELAAEEAAKKKALE 127
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +2
Query: 86 KKEKQAEKENRKRKLERDIEVELGDDYVLDLKKNYTEIPEDER 214
K++K+ EKENRK K E D + + DD KK ++ E +
Sbjct: 174 KEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSKGAEKSK 216
>AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical
protein Y40B1A.4 protein.
Length = 203
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 56 PPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDY 166
PPV PS A+K Q + ++ D + +G+DY
Sbjct: 34 PPVAGPSAPARKPNQIQHRQMIPQMNEDGMMNMGNDY 70
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 41 DDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKN 187
+ R P L LA ++A ENRKRK V++ D V + +N
Sbjct: 591 ESSSRTPALKAKPLATSTEKAVYENRKRKSSPFRRVQMTKDSVSEKFRN 639
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.1 bits (57), Expect = 8.0
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 41 DDKPRPPVLPPSVLAKKEKQAEKENRKRKLERDIEVELGDDYVLDLKKN 187
+ R P L LA ++A ENRKRK V++ D V + +N
Sbjct: 866 ESSSRTPALKAKPLATSTEKAVYENRKRKSSPFRRVQMTKDSVSEKFRN 914
>Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical
protein M195.4 protein.
Length = 142
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 29 PAPRDDKPRPPVLPPSVLAKKEKQAEKENRKRK 127
P + KP P + P+ KK+K + E KRK
Sbjct: 62 PQDKSQKPFPEIKMPTESMKKKKNTDNEIDKRK 94
>Z37140-3|CAA85500.1| 189|Caenorhabditis elegans Hypothetical
protein ZK899.3 protein.
Length = 189
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 335 TPRPRSSWTTP*GRSGNWTGRYATRRPSSRTSL 433
TPRPR +W P + ++ + SSRT L
Sbjct: 95 TPRPRIAWAIPNAAHHKGSSKHQKQSKSSRTLL 127
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 86 KKEKQAEKENRKRKLERDIEVELGDDYVL---DLKKNYTEIPE-DERYDVIPEIWEGHNI 253
+ +K EKE ++RK +R+ E + Y DLKK E+ + E+ + E E
Sbjct: 370 RAKKDLEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEK 429
Query: 254 ATISTRTSL 280
TIS + SL
Sbjct: 430 LTISVQNSL 438
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 86 KKEKQAEKENRKRKLERDIEVELGDDYVL---DLKKNYTEIPE-DERYDVIPEIWEGHNI 253
+ +K EKE ++RK +R+ E + Y DLKK E+ + E+ + E E
Sbjct: 370 RAKKDLEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEK 429
Query: 254 ATISTRTSL 280
TIS + SL
Sbjct: 430 LTISVQNSL 438
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 86 KKEKQAEKENRKRKLERDIEVELGDDYVL---DLKKNYTEIPE-DERYDVIPEIWEGHNI 253
+ +K EKE ++RK +R+ E + Y DLKK E+ + E+ + E E
Sbjct: 130 RAKKDLEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEK 189
Query: 254 ATISTRTSL 280
TIS + SL
Sbjct: 190 LTISVQNSL 198
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.1 bits (57), Expect = 8.0
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +2
Query: 86 KKEKQAEKENRKRKLERDIEVELGDDYVL---DLKKNYTEIPE-DERYDVIPEIWEGHNI 253
+ +K EKE ++RK +R+ E + Y DLKK E+ + E+ + E E
Sbjct: 370 RAKKDLEKEEKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEK 429
Query: 254 ATISTRTSL 280
TIS + SL
Sbjct: 430 LTISVQNSL 438
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 2 ILNRLHVAVPAPRDDKPRPPVLPPSVL--AKKEKQAEKENRKRK 127
+L+++ + P P P+ P PP+ + + ++ E+E R+RK
Sbjct: 189 VLDQIMSSPPPPPTSPPQLPPTPPARITSVRSDESIEEEERRRK 232
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 2 ILNRLHVAVPAPRDDKPRPPVLPPSVL--AKKEKQAEKENRKRK 127
+L+++ + P P P+ P PP+ + + ++ E+E R+RK
Sbjct: 189 VLDQIMSSPPPPPTSPPQLPPTPPARITSVRSDESIEEEERRRK 232
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 27.1 bits (57), Expect = 8.0
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 287 WQSWRRTRNCARLAACTPRPRSSWT 361
W RR +C R C+PR WT
Sbjct: 115 WLGARRKGSCPRAGICSPRDTFFWT 139
>AL032648-6|CAC35867.1| 244|Caenorhabditis elegans Hypothetical
protein Y54G9A.7 protein.
Length = 244
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 32 APRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERD 139
AP P L P +L + K+ +K R+R+ +RD
Sbjct: 97 APGTPNKSPMWLSPRLLTIRRKKMKKHKRRRRYDRD 132
>AF303259-1|AAG50217.1| 244|Caenorhabditis elegans 2O16 protein.
Length = 244
Score = 27.1 bits (57), Expect = 8.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 32 APRDDKPRPPVLPPSVLAKKEKQAEKENRKRKLERD 139
AP P L P +L + K+ +K R+R+ +RD
Sbjct: 97 APGTPNKSPMWLSPRLLTIRRKKMKKHKRRRRYDRD 132
>AC024757-5|AAK68430.1| 814|Caenorhabditis elegans Hypothetical
protein Y37E11AL.8 protein.
Length = 814
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/28 (32%), Positives = 18/28 (64%)
Frame = +2
Query: 74 SVLAKKEKQAEKENRKRKLERDIEVELG 157
+++ +K A +ENRKR + D+++ G
Sbjct: 128 TIIQNAKKSASRENRKRLVPSDVDIACG 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,144,700
Number of Sequences: 27780
Number of extensions: 162742
Number of successful extensions: 1308
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1302
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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