Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00685
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p pro... 32 0.96
AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein ... 32 0.96
AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB... 32 0.96
AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA... 31 1.3
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 29 5.1
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 29 5.1
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 29 5.1
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 29 5.1
AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p pro... 29 6.8
DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein. 29 8.9
BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p pro... 29 8.9
AY058464-1|AAL13693.1| 819|Drosophila melanogaster GH26553p pro... 29 8.9
AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB... 29 8.9
AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD... 29 8.9
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 29 8.9
AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA ... 29 8.9
>BT023767-1|AAZ41775.1| 1144|Drosophila melanogaster RE11051p
protein.
Length = 1144
Score = 31.9 bits (69), Expect = 0.96
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 328 DEDVKEVTKNLKNVSVTNKSQKKKADVTSEDE 423
D+DVK VTK +K ++V K + K D + E+E
Sbjct: 49 DDDVKAVTKGVKKLNVKGKGKAGKNDDSDEEE 80
>AF143207-1|AAF36532.1| 1144|Drosophila melanogaster IF2 protein
protein.
Length = 1144
Score = 31.9 bits (69), Expect = 0.96
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 328 DEDVKEVTKNLKNVSVTNKSQKKKADVTSEDE 423
D+DVK VTK +K ++V K + K D + E+E
Sbjct: 49 DDDVKAVTKGVKKLNVKGKGKAGKNDDSDEEE 80
>AE014296-661|AAF47774.2| 1144|Drosophila melanogaster CG10840-PB
protein.
Length = 1144
Score = 31.9 bits (69), Expect = 0.96
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 328 DEDVKEVTKNLKNVSVTNKSQKKKADVTSEDE 423
D+DVK VTK +K ++V K + K D + E+E
Sbjct: 49 DDDVKAVTKGVKKLNVKGKGKAGKNDDSDEEE 80
>AE014296-828|AAN11599.1| 1465|Drosophila melanogaster CG32251-PA
protein.
Length = 1465
Score = 31.5 bits (68), Expect = 1.3
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1
Query: 331 EDVKEVTKNLKNVSVTNKSQKKKADVTSEDESDSEQEV 444
ED EV K +N +T K KKKA + D+ DS+ EV
Sbjct: 1100 EDALEVDKP-RNKKLTKKRPKKKAKLGFSDDEDSDDEV 1136
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 337 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSEQEV 444
+KE +K L+N+S+ ++ KKK + S+ + S+ +
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSDNSL 298
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 337 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSEQEV 444
+KE +K L+N+S+ ++ KKK + S+ + S+ +
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSDNSL 298
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 337 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSEQEV 444
+KE +K L+N+S+ ++ KKK + S+ + S+ +
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSDNSL 298
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 29.5 bits (63), Expect = 5.1
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 337 VKEVTKNLKNVSVTNKSQKKKADVTSEDESDSEQEV 444
+KE +K L+N+S+ ++ KKK + S+ + S+ +
Sbjct: 263 IKEQSKKLRNLSLKTRTAKKKGQIISKSNAVSDNSL 298
>AY113649-1|AAM29654.1| 701|Drosophila melanogaster SD12335p
protein.
Length = 701
Score = 29.1 bits (62), Expect = 6.8
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 331 EDVKEVTKNLKNVSVTNKSQKKKADVTSEDESDSEQEV 444
ED EV K +N + K KKKA + D+ DS+ EV
Sbjct: 336 EDALEVDKP-RNKKLIKKRPKKKAKLGFSDDEDSDDEV 372
>DQ138926-1|ABA86532.1| 1873|Drosophila melanogaster CG1241 protein.
Length = 1873
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 492 FIRNRGDVSPPEAPMSSEDEKPIQ 563
++ N D+ PPE P+ +ED KP +
Sbjct: 1148 YVANDRDLCPPEEPILNEDTKPAE 1171
>BT015248-1|AAT94477.1| 1906|Drosophila melanogaster LP21012p protein.
Length = 1906
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 492 FIRNRGDVSPPEAPMSSEDEKPIQ 563
++ N D+ PPE P+ +ED KP +
Sbjct: 1167 YVANDRDLCPPEEPILNEDTKPAE 1190
>AY058464-1|AAL13693.1| 819|Drosophila melanogaster GH26553p
protein.
Length = 819
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 492 FIRNRGDVSPPEAPMSSEDEKPIQ 563
++ N D+ PPE P+ +ED KP +
Sbjct: 80 YVANDRDLCPPEEPILNEDTKPAE 103
>AE014296-1583|AAF50321.2| 1374|Drosophila melanogaster CG4821-PB,
isoform B protein.
Length = 1374
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 693 PLTQHIHSNSARTFQYHHHYHP 628
P T+H H NS+ +HHH HP
Sbjct: 694 PFTEH-HPNSSPHQHHHHHRHP 714
>AE014296-1581|AAN11984.1| 1450|Drosophila melanogaster CG4821-PD,
isoform D protein.
Length = 1450
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 693 PLTQHIHSNSARTFQYHHHYHP 628
P T+H H NS+ +HHH HP
Sbjct: 770 PFTEH-HPNSSPHQHHHHHRHP 790
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 28.7 bits (61), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 693 PLTQHIHSNSARTFQYHHHYHP 628
P T+H H NS+ +HHH HP
Sbjct: 2106 PFTEH-HPNSSPHQHHHHHRHP 2126
>AE014296-511|AAF47687.1| 1906|Drosophila melanogaster CG1241-PA
protein.
Length = 1906
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 492 FIRNRGDVSPPEAPMSSEDEKPIQ 563
++ N D+ PPE P+ +ED KP +
Sbjct: 1167 YVANDRDLCPPEEPILNEDTKPAE 1190
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,356,455
Number of Sequences: 53049
Number of extensions: 327069
Number of successful extensions: 2412
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2340
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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