Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00685
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical pr...    30   1.5  
U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical pr...    29   3.5  
X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomera...    28   6.2  
U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U00048-1|AAB53825.2|  425|Caenorhabditis elegans Lethal protein ...    28   6.2  
AJ010553-1|CAA09234.1|  425|Caenorhabditis elegans LET-756 prote...    28   6.2  
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    28   8.1  
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    28   8.1  
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.      28   8.1  
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge...    28   8.1  

>U70845-2|AAB09100.1|  102|Caenorhabditis elegans Hypothetical
           protein F22H10.2 protein.
          Length = 102

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 696 SPLTQHIHSNSARTFQYHHHYH 631
           +P T H+H+N      +HHH+H
Sbjct: 45  APPTVHVHNNGGHHHGHHHHHH 66


>U64855-1|AAB04980.1|  594|Caenorhabditis elegans Hypothetical
           protein ZK742.2 protein.
          Length = 594

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 20/92 (21%), Positives = 43/92 (46%)
 Frame = +1

Query: 166 QKRARRIKPLKRATAILKRQISAMRTGSERKKIVDSDXXXXXXXXXXXXXXXXIDEDVKE 345
           +K  +R++ LK+    L ++I   R G  +  ++ +D                 D+D  +
Sbjct: 295 RKLVKRLQLLKQPGEKLAQEIIDYRDGI-KNLVLKADELRIINPRPPKNKRKKSDDDFID 353

Query: 346 VTKNLKNVSVTNKSQKKKADVTSEDESDSEQE 441
           V  ++ ++ +   ++K + DV S+DES+   E
Sbjct: 354 VDISIDDILMVQYAEKLEVDVKSKDESEKITE 385


>X96762-1|CAA65537.1|  806|Caenorhabditis elegans DNA topoisomerase
           protein.
          Length = 806

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +2

Query: 554 TDPEESCTRKERNHRKKRQESQKK 625
           TD EE   RKE+  RKK +  +KK
Sbjct: 149 TDDEEEQKRKEKERRKKEKREKKK 172


>U23523-5|AAC46556.1|   77|Caenorhabditis elegans Hypothetical
           protein F53A9.1 protein.
          Length = 77

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -1

Query: 693 PLTQHIHSNSARTFQYHHHYH 631
           P T H+H++      +HHH+H
Sbjct: 31  PQTVHVHTDGGHHHGHHHHHH 51


>U23523-4|AAC46557.1|   83|Caenorhabditis elegans Hypothetical
           protein F53A9.2 protein.
          Length = 83

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 696 SPLTQHIHSNSARTFQYHHHYH 631
           +P T H+H++      +HHH+H
Sbjct: 29  APPTVHVHTDGGHHHGHHHHHH 50


>U00048-1|AAB53825.2|  425|Caenorhabditis elegans Lethal protein 756
           protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 696 SPLTQHIHSNSARTFQYHHHYHP 628
           SP+TQ  H NS     +HHH+HP
Sbjct: 370 SPVTQAPHHNS----HHHHHHHP 388


>AJ010553-1|CAA09234.1|  425|Caenorhabditis elegans LET-756 protein
           protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 696 SPLTQHIHSNSARTFQYHHHYHP 628
           SP+TQ  H NS     +HHH+HP
Sbjct: 370 SPVTQAPHHNS----HHHHHHHP 388


>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 699  DSPLTQHIHSNSARTFQYHHHYHPSFFWLSC 607
            D+  +   H NS+RT   +H +H S +  SC
Sbjct: 1050 DATTSSQSHDNSSRTVSPNHRHHSSSYSNSC 1080


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
            methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 699  DSPLTQHIHSNSARTFQYHHHYHPSFFWLSC 607
            D+  +   H NS+RT   +H +H S +  SC
Sbjct: 1064 DATTSSQSHDNSSRTVSPNHRHHSSSYSNSC 1094


>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
          Length = 1359

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
 Frame = +1

Query: 160 VKQKRARRIKPLKRATAILKRQISAMRTGS--ERKKIVDSDXXXXXXXXXXXXXXXXIDE 333
           +K+KR R  KP  +     KR+ S+       E +    S                  +E
Sbjct: 39  LKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEE 98

Query: 334 DVKEVTKNLKNVSVTNKSQ-KKKADVTSEDESDSEQE 441
           + ++ +K+ K V    K + KKK   +S ++ DS++E
Sbjct: 99  EDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEE 135


>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
           related protein 1 protein.
          Length = 1359

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
 Frame = +1

Query: 160 VKQKRARRIKPLKRATAILKRQISAMRTGS--ERKKIVDSDXXXXXXXXXXXXXXXXIDE 333
           +K+KR R  KP  +     KR+ S+       E +    S                  +E
Sbjct: 39  LKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAKSESESDESDEE 98

Query: 334 DVKEVTKNLKNVSVTNKSQ-KKKADVTSEDESDSEQE 441
           + ++ +K+ K V    K + KKK   +S ++ DS++E
Sbjct: 99  EDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEE 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,261,805
Number of Sequences: 27780
Number of extensions: 176477
Number of successful extensions: 990
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)