Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00683
         (737 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    52   4e-07
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    41   0.001
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    40   0.001
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    39   0.003
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    35   0.052
Z92786-10|CAB07212.3|  984|Caenorhabditis elegans Hypothetical p...    32   0.49 
AL021473-3|CAA16306.3|  984|Caenorhabditis elegans Hypothetical ...    32   0.49 
U29488-1|AAA68773.2|  338|Caenorhabditis elegans Serpentine rece...    29   3.4  
AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical ...    29   3.4  
AL023816-6|CAA19435.1|  341|Caenorhabditis elegans Hypothetical ...    28   6.0  
AL022274-3|CAA18359.1|  341|Caenorhabditis elegans Hypothetical ...    28   6.0  
Z81064-3|CAB02961.2|  268|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 52.0 bits (119), Expect = 4e-07
 Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
 Frame = +3

Query: 57  FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEE 224
           FE F K++NR+YKD+++ +  + +F K    +++LN K+      T FGINKF+D +  E
Sbjct: 43  FEDFKKKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAE 102

Query: 225 QQSRLGLRLP 254
              RL   +P
Sbjct: 103 FHGRLSNVVP 112


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 40.7 bits (91), Expect = 0.001
 Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
 Frame = +3

Query: 57  FEIFVKEHNREYKDDADRELHYQSF---KKHLAEINQLNEKNPY-TTFGINKFADYTPEE 224
           FE F+ ++ R YKD+ +++  +Q F      + ++N+  +K  + T +GINKF+D + +E
Sbjct: 47  FEDFIVKYKRNYKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 40.3 bits (90), Expect = 0.001
 Identities = 18/61 (29%), Positives = 33/61 (54%)
 Frame = +3

Query: 48  KELFEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQ 227
           +++F  F+ + +R+Y    + E  YQ F +++ E     E+N      +N+F D+T EE 
Sbjct: 79  EQMFNDFILKFDRKYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEEL 138

Query: 228 Q 230
           Q
Sbjct: 139 Q 139


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 39.1 bits (87), Expect = 0.003
 Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
 Frame = +3

Query: 57  FEIFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEE 224
           F  F K+ +R YK +A+ +L  Q+F K    + +LN+        + F +N+F+D T  E
Sbjct: 44  FVEFKKKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSE 103

Query: 225 QQSRLGLRLP 254
              RL  R P
Sbjct: 104 LHQRLS-RFP 112


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 35.1 bits (77), Expect = 0.052
 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
 Frame = +3

Query: 78  HNREYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 236
           H + Y+  A+++     F K+  +I +LN K        TFG NKFAD   +E  +R
Sbjct: 3   HKKHYRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59


>Z92786-10|CAB07212.3|  984|Caenorhabditis elegans Hypothetical
           protein Y20C6A.1 protein.
          Length = 984

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 20/81 (24%), Positives = 32/81 (39%)
 Frame = +3

Query: 63  IFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLG 242
           I +KEH    +  +  EL++  + K     N  N   P+  FG  +  +Y   E+  R  
Sbjct: 537 IMLKEHFLVNEKPSTFELNFNRYAKTSEISNDTNNVEPHEVFGETEHVEYKNGEELYRKI 596

Query: 243 LRLPLRRHKFCDFSLSECYSK 305
              P   H   D  +  C +K
Sbjct: 597 WYFPHEVHTSYDLRIEYCNTK 617


>AL021473-3|CAA16306.3|  984|Caenorhabditis elegans Hypothetical
           protein Y20C6A.1 protein.
          Length = 984

 Score = 31.9 bits (69), Expect = 0.49
 Identities = 20/81 (24%), Positives = 32/81 (39%)
 Frame = +3

Query: 63  IFVKEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLG 242
           I +KEH    +  +  EL++  + K     N  N   P+  FG  +  +Y   E+  R  
Sbjct: 537 IMLKEHFLVNEKPSTFELNFNRYAKTSEISNDTNNVEPHEVFGETEHVEYKNGEELYRKI 596

Query: 243 LRLPLRRHKFCDFSLSECYSK 305
              P   H   D  +  C +K
Sbjct: 597 WYFPHEVHTSYDLRIEYCNTK 617


>U29488-1|AAA68773.2|  338|Caenorhabditis elegans Serpentine
           receptor, class a (alpha)protein 31 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 470 KALAFLLYFFIT*PVNELNSLLLLSGYRSP*TSTILIPSLAF 595
           +A+  ++   IT  V   ++  +LS Y+S   +TIL+PS+AF
Sbjct: 238 RAVCIIIATQITCLVTTASTTEILSAYKSSIPNTILLPSIAF 279


>AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical
           protein E01A2.2a protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
 Frame = +3

Query: 30  YDLNQAKELFEIFVKEHNRE------YK-DDAD--RELHYQSFKKHLAEINQLNEKNPYT 182
           Y     K   E F + H  E      YK DDA   RE H ++ +K L   N+L E+  + 
Sbjct: 110 YKTEHRKHQLERFFRAHKDEEWFRLKYKPDDAKKLREAHLENVQKRLQVFNELKEQGQFN 169

Query: 183 TFGINKFAD 209
            F ++ F D
Sbjct: 170 KFSLD-FGD 177


>AL023816-6|CAA19435.1|  341|Caenorhabditis elegans Hypothetical
           protein T05G11.7 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 414 LANGNIIFLFCLGICLCFRKPWR 482
           +ANG + FL CL +C  +RK ++
Sbjct: 311 IANGTVHFLLCLFLCSQYRKSYK 333


>AL022274-3|CAA18359.1|  341|Caenorhabditis elegans Hypothetical
           protein T05G11.7 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 414 LANGNIIFLFCLGICLCFRKPWR 482
           +ANG + FL CL +C  +RK ++
Sbjct: 311 IANGTVHFLLCLFLCSQYRKSYK 333


>Z81064-3|CAB02961.2|  268|Caenorhabditis elegans Hypothetical
           protein F16B12.4 protein.
          Length = 268

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 8/112 (7%)
 Frame = +3

Query: 72  KEHNREYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQSRLGLRL 251
           K H+ E+K+    EL +   +  L   N  N+KN     G N   D   EEQ +    ++
Sbjct: 160 KTHSAEFKEFYLAELFHNIVEPKLLVENYYNQKN---KIGNNWRMDRV-EEQMTDEERQI 215

Query: 252 PLRRHKFCDFSLSECY-------SKRNKCIVTACKMFKIYR-I*LINYLNHL 383
              + K C+ S+ E +        KRNK  + ACK  + Y+ I L  +L+ L
Sbjct: 216 LEEKMKACNISIIESHHVKKSHKRKRNK-EIDACKQPRNYKEIDLATHLSDL 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,994,022
Number of Sequences: 27780
Number of extensions: 332189
Number of successful extensions: 865
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)