Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00682
         (617 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC012205-1|AAH12205.1|  115|Homo sapiens PLAC8 protein protein.        29   9.9  
AJ422147-1|CAD19530.1|  115|Homo sapiens C15 protein protein.          29   9.9  
AF099505-1|AAF00091.1|  392|Homo sapiens colon carcinoma related...    29   9.9  

>BC012205-1|AAH12205.1|  115|Homo sapiens PLAC8 protein protein.
          Length = 115

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +1

Query: 49  ECFICLKCLSLFN-YSTRYSKVGSVFLECVISLCDYSCQICN-KSTD*LRRVVFT 207
           EC +C   +++   Y TRY   GS+  + + +LC   C +C  K +D  RR + T
Sbjct: 60  ECCLCGTGVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKPSDYRRRAMRT 114


>AJ422147-1|CAD19530.1|  115|Homo sapiens C15 protein protein.
          Length = 115

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +1

Query: 49  ECFICLKCLSLFN-YSTRYSKVGSVFLECVISLCDYSCQICNKSTD*LRR 195
           EC +C   +++   Y TRY   GS+  + + +LC   C +C    D  RR
Sbjct: 60  ECCLCGTSVAMRTLYRTRYGIPGSICDDYMATLCCPHCTLCQIKRDINRR 109


>AF099505-1|AAF00091.1|  392|Homo sapiens colon carcinoma related
           protein protein.
          Length = 392

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +2

Query: 359 LRIYRELCDACLCIFKFFFLRVNDFLSNFWIVVHFFFKILMILL 490
           LRI+    + C+ ++ F F + N ++ N   V+ F  KIL++++
Sbjct: 324 LRIFSN--ELCMVLWYFMFPKENGYMKNLSSVIIFLTKILLVMV 365


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,183,140
Number of Sequences: 237096
Number of extensions: 1290828
Number of successful extensions: 2107
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2053
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2107
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)