Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00681
(717 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 32 0.47
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z34533-7|CAA84301.2| 369|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY158691-1|AAN41643.1| 369|Caenorhabditis elegans choline kinas... 31 1.1
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 30 1.9
AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucle... 30 1.9
AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila so... 30 1.9
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 3.3
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 3.3
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 3.3
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 3.3
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 29 3.3
AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical ... 29 4.4
Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical pr... 28 5.8
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 28 5.8
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 31.9 bits (69), Expect = 0.47
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +1
Query: 229 RSYNVNEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG--RSLSG 402
R+Y++ VR T E P + TT TLP++ + T S+ + R R L
Sbjct: 486 RAYHMMRDRDVRVRYPTTEEPVPVEPVTFGQTTRTLPISQQPTTSRSHMTLRSAMRRLDS 545
Query: 403 ALQTS---PGLSTRPKTRR 450
T P + +RP+TRR
Sbjct: 546 DRPTDEEIPPIESRPQTRR 564
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/83 (27%), Positives = 41/83 (49%)
Frame = +1
Query: 199 TNLDKIRGFPRSYNVNEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPS 378
T+ +R + R+S RA + ++ PTG+P+ T PVT+ T++S + P+
Sbjct: 152 TSTPVVRNILQQLTTPRSARTSTRAASG-NRTPTGTPNM--TRNVRPVTNRTSSSNVSPA 208
Query: 379 ARGRSLSGALQTSPGLSTRPKTR 447
A Q +PG S+ ++R
Sbjct: 209 A---------QVTPGTSSNHRSR 222
>Z34533-7|CAA84301.2| 369|Caenorhabditis elegans Hypothetical
protein B0285.9 protein.
Length = 369
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 435 SEDSSLPTDILKILTTFKISSVSWQNGLYYGAGYELPADLKTQTAFSTKMVFADATSINN 614
S + T+IL++ +T ++ + W+ G Y G++L L ++TA ++ F +N
Sbjct: 212 SHNDLASTNILELNSTKELVLIDWEFGTYNWRGFDLAMHL-SETAIDYRVPFPPGIKMNG 270
Query: 615 HL 620
L
Sbjct: 271 DL 272
>AY158691-1|AAN41643.1| 369|Caenorhabditis elegans choline kinase
CKB-2 protein.
Length = 369
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 435 SEDSSLPTDILKILTTFKISSVSWQNGLYYGAGYELPADLKTQTAFSTKMVFADATSINN 614
S + T+IL++ +T ++ + W+ G Y G++L L ++TA ++ F +N
Sbjct: 212 SHNDLASTNILELNSTKELVLIDWEFGTYNWRGFDLAMHL-SETAIDYRVPFPPGIKMNG 270
Query: 615 HL 620
L
Sbjct: 271 DL 272
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 259 SSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG--RSLSGALQTSPGLST 432
SS +TT + T +PS T T+P T+ + + R +G L TS + T
Sbjct: 339 SSTTSTTTTTTTTTETPSTTVITTTIPSTTSEPEATIDVKTRDSKEDTNGVLPTSSAIET 398
Query: 433 RPKTRRC 453
P C
Sbjct: 399 PPYPENC 405
>AF251308-1|AAF82360.1| 1413|Caenorhabditis elegans guanine nucleotide
exchange factorfor RAS protein.
Length = 1413
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 226 PRSYNVNEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG 387
PRS N+ S+ TT+ P S + +TAT P T TT + PS+ G
Sbjct: 1276 PRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT---PSSAG 1326
>AC006692-9|AAF39972.5| 1493|Caenorhabditis elegans Drosophila sos
homolog protein 1 protein.
Length = 1493
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +1
Query: 226 PRSYNVNEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARG 387
PRS N+ S+ TT+ P S + +TAT P T TT + PS+ G
Sbjct: 1276 PRSSRANQSNSVSLPPTTQAPMPPAPKSSGMMSTATSPTTLTTTTT---PSSAG 1326
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 229 RSYNVNEQLR-SSVRATTRESKY---PTGSPSCLWTTATLPVTSETTASKLLPSARGRSL 396
RS N E R SS+R+T+ + P + S ATLP T+ + S++ S+ S
Sbjct: 1364 RSVNEIETNRPSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSA 1423
Query: 397 SGALQTSPGLST 432
S + +SP ++
Sbjct: 1424 SNSGTSSPAATS 1435
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +1
Query: 274 TTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKT 444
TT + T +P+ TT T P T+ TTA + + T +T PKT
Sbjct: 265 TTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKT 321
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 244 NEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 423
N + S+ R +TR S T S T T+ + +T + + P +GRSLS +
Sbjct: 2308 NRRPSSTPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLSRDAERLLE 2366
Query: 424 LSTRPKTRR 450
+ R RR
Sbjct: 2367 IQPRAPPRR 2375
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 244 NEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 423
N + S+ R +TR S T S T T+ + +T + + P +GRSLS +
Sbjct: 2308 NRRPSSTPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLSRDAERLLE 2366
Query: 424 LSTRPKTRR 450
+ R RR
Sbjct: 2367 IQPRAPPRR 2375
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/69 (28%), Positives = 31/69 (44%)
Frame = +1
Query: 244 NEQLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPG 423
N + S+ R +TR S T S T T+ + +T + + P +GRSLS +
Sbjct: 2308 NRRPSSTPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLSRDAERLLE 2366
Query: 424 LSTRPKTRR 450
+ R RR
Sbjct: 2367 IQPRAPPRR 2375
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Frame = +1
Query: 229 RSYNVNEQLR-SSVRATTRESKY---PTGSPSCLWTTATLPVTSETTASKLLPSARGRSL 396
RS N E R SS+R+T+ + P + S ATLP T+ + S++ S+ S
Sbjct: 1364 RSVNEIETNRPSSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSA 1423
Query: 397 SGALQTSPGLST 432
S + +SP ++
Sbjct: 1424 SNSGTSSPAATS 1435
>AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical
protein Y111B2A.9b protein.
Length = 326
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 99 VLPNTLLRYVPPREDPDRQRAGTPCRLM 182
V P+ L+ PP DP QR+GTP L+
Sbjct: 4 VSPSNLVFPPPPSPDPYTQRSGTPSALL 31
>Z71264-2|CAA95830.1| 1202|Caenorhabditis elegans Hypothetical protein
K07G5.3 protein.
Length = 1202
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +1
Query: 202 NLDKIRGFPRSYNVNEQ-LRSSVRATTRESKYP 297
NLDK + +NVNE+ L S AT R SK P
Sbjct: 1043 NLDKYTNWKPLFNVNEEPLESIQTATVRYSKLP 1075
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 274 TTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQTSPGLSTRPKTR 447
TT +Y T SP+ TT+T P T+ T+ + + + + T P ++ P T+
Sbjct: 196 TTERVRYATFSPNIPMTTSTTPTTT-TSTFPTSTTEKSTTAQPSTTTKPTTTSPPTTQ 252
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,243,237
Number of Sequences: 27780
Number of extensions: 313231
Number of successful extensions: 837
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1676746902
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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