Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00680
         (546 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...   149   4e-38
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    29   0.13 
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    26   0.93 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   1.6  
AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside ...    25   2.2  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.6  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.7  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score =  149 bits (362), Expect = 4e-38
 Identities = 71/80 (88%), Positives = 75/80 (93%)
 Frame = +2

Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
           K PRS  +T+VYDAILEDLVFPAE+VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTF 
Sbjct: 113 KRPRSPNVTAVYDAILEDLVFPAEVVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFA 172

Query: 431 SVYKKLTGREVTFEFPEPYL 490
           SVYKKLTGR+VTFEFPE YL
Sbjct: 173 SVYKKLTGRDVTFEFPENYL 192



 Score =  132 bits (318), Expect = 1e-32
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +3

Query: 3   ETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKH 182
           E NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+PK KAFQK+Q RLVRELEKKFSGKH
Sbjct: 30  EMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQTRLVRELEKKFSGKH 89

Query: 183 VVFVGDRKILPKPSHKTRVANKQK 254
           VVF+ +R+ILPKP    R  NKQK
Sbjct: 90  VVFIAERRILPKPMRGRRDPNKQK 113


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 28.7 bits (61), Expect = 0.13
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +2

Query: 221 QPQNSCC*QTKGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQ 397
           QP+ S       PRS  LT+V   ++ +L + +E+V +R R K  G    +    + QQ
Sbjct: 232 QPRASTSRAVMPPRSEALTAVRGDVVPELTY-SEVVRRRYRGKATGKPRSQQQPQQQQQ 289


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.8 bits (54), Expect = 0.93
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 507 VIG*VYK*GSGNSKVTSRPVSFLYTDWKV 421
           VI  V K G G++  + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 272 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 442
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 20/57 (35%), Positives = 32/57 (56%)
 Frame = +2

Query: 272 LTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYK 442
           L S Y+ ++  +V  ++++  R+ +KL  SQLI V+L KNQ  T    V+     YK
Sbjct: 35  LLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMTTNLWVEQSWYDYK 88


>AM690372-1|CAM84316.1|  353|Anopheles gambiae purine nucleoside
           phosphorylase protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 2.2
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +1

Query: 424 LPVCIQEANGTRSDLRVPRTLFVNLAYD 507
           LPV  Q+   T     +PRT  V   YD
Sbjct: 46  LPVAYQQKAATSGPFHMPRTEHVGYTYD 73


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 170 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 84
           ELLFE    P LDLLK +     +I  D+
Sbjct: 96  ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 61  KLNYTIRSRSSSMCR 105
           + N TIRSRSSS+ R
Sbjct: 271 RTNSTIRSRSSSLSR 285


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,815
Number of Sequences: 2352
Number of extensions: 11515
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50460840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)