Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00680
(546 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 134 3e-31
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 134 3e-31
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 134 3e-31
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 134 3e-31
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 134 3e-31
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 134 3e-31
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 4e-19
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 1.1
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 30 4.6
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 30 4.6
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 30 4.6
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 30 4.6
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 30 4.6
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 6.1
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 6.1
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 30 6.1
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 6.1
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 6.1
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 134 bits (323), Expect = 3e-31
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +2
Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
K PRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF
Sbjct: 115 KRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFS 174
Query: 431 SVYKKLTGREVTFEFPE 481
VYKKLTG++V FEFPE
Sbjct: 175 GVYKKLTGKDVNFEFPE 191
Score = 128 bits (308), Expect = 2e-29
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
E NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGK
Sbjct: 31 EMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90
Query: 180 HVVFVGDRKILPKPSHKTRVANKQK 254
HVVF+ R+ILPKP+ K+R NKQK
Sbjct: 91 HVVFIAQRRILPKPTRKSRTKNKQK 115
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 134 bits (323), Expect = 3e-31
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +2
Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
K PRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF
Sbjct: 113 KRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFS 172
Query: 431 SVYKKLTGREVTFEFPE 481
VYKKLTG++V FEFPE
Sbjct: 173 GVYKKLTGKDVNFEFPE 189
Score = 128 bits (308), Expect = 2e-29
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
E NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGK
Sbjct: 29 EMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 88
Query: 180 HVVFVGDRKILPKPSHKTRVANKQK 254
HVVF+ R+ILPKP+ K+R NKQK
Sbjct: 89 HVVFIAQRRILPKPTRKSRTKNKQK 113
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 134 bits (323), Expect = 3e-31
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +2
Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
K PRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF
Sbjct: 115 KRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFS 174
Query: 431 SVYKKLTGREVTFEFPE 481
VYKKLTG++V FEFPE
Sbjct: 175 GVYKKLTGKDVNFEFPE 191
Score = 128 bits (308), Expect = 2e-29
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
E NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGK
Sbjct: 31 EMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90
Query: 180 HVVFVGDRKILPKPSHKTRVANKQK 254
HVVF+ R+ILPKP+ K+R NKQK
Sbjct: 91 HVVFIAQRRILPKPTRKSRTKNKQK 115
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 134 bits (323), Expect = 3e-31
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +2
Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
K PRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF
Sbjct: 115 KRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFS 174
Query: 431 SVYKKLTGREVTFEFPE 481
VYKKLTG++V FEFPE
Sbjct: 175 GVYKKLTGKDVNFEFPE 191
Score = 128 bits (308), Expect = 2e-29
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
E NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGK
Sbjct: 31 EMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90
Query: 180 HVVFVGDRKILPKPSHKTRVANKQK 254
HVVF+ R+ILPKP+ K+R NKQK
Sbjct: 91 HVVFIAQRRILPKPTRKSRTKNKQK 115
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 134 bits (323), Expect = 3e-31
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +2
Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
K PRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF
Sbjct: 115 KRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFS 174
Query: 431 SVYKKLTGREVTFEFPE 481
VYKKLTG++V FEFPE
Sbjct: 175 GVYKKLTGKDVNFEFPE 191
Score = 128 bits (308), Expect = 2e-29
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
E NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGK
Sbjct: 31 EMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90
Query: 180 HVVFVGDRKILPKPSHKTRVANKQK 254
HVVF+ R+ILPKP+ K+R NKQK
Sbjct: 91 HVVFIAQRRILPKPTRKSRTKNKQK 115
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 134 bits (323), Expect = 3e-31
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +2
Query: 251 KGPRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQ 430
K PRSRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV+TF
Sbjct: 115 KRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFS 174
Query: 431 SVYKKLTGREVTFEFPE 481
VYKKLTG++V FEFPE
Sbjct: 175 GVYKKLTGKDVNFEFPE 191
Score = 128 bits (308), Expect = 2e-29
Identities = 62/85 (72%), Positives = 74/85 (87%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 ETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
E NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGK
Sbjct: 31 EMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGK 90
Query: 180 HVVFVGDRKILPKPSHKTRVANKQK 254
HVVF+ R+ILPKP+ K+R NKQK
Sbjct: 91 HVVFIAQRRILPKPTRKSRTKNKQK 115
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 4e-19
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 263 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 418
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 32.3 bits (70), Expect = 1.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 435 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 301
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 72 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 72 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 72 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 72 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.3 bits (65), Expect = 4.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 72 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 179
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 359 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 442
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 359 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 442
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 3 ETNSDLKAQLRELYI--TKAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 167
E + +++L+E+ I + KE+ E+HNK+ + M + QK Q R + ELEKK
Sbjct: 588 EVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 359 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 442
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 29.9 bits (64), Expect = 6.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 359 SQLIKVHLDKNQQTTIEHKVDTFQSVYK 442
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,249,369
Number of Sequences: 237096
Number of extensions: 1589931
Number of successful extensions: 3063
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3057
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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