Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00679
(342 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21 pro... 114 8e-26
CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein. 114 8e-26
BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21 p... 114 8e-26
BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein. 114 8e-26
AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21 p... 114 8e-26
AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21 p... 114 8e-26
AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21 p... 114 8e-26
AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21 p... 97 1e-20
AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21 p... 74 1e-13
BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein. 73 2e-13
AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21 p... 73 2e-13
X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation f... 69 4e-12
BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3 (Drosoph... 28 6.6
AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein. 28 6.6
AL122074-1|CAB59249.1| 333|Homo sapiens hypothetical protein pr... 28 6.6
AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein. 28 6.6
AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein. 28 6.6
Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein. 28 8.7
U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein. 28 8.7
BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homo... 28 8.7
AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor Ta... 28 8.7
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo... 28 8.7
AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein. 28 8.7
>L04483-1|AAA99893.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>CR542132-1|CAG46929.1| 83|Homo sapiens RPS21 protein.
Length = 83
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>BC021990-1|AAH21990.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>BC018140-1|AAH18140.1| 81|Homo sapiens RPS21 protein protein.
Length = 81
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>AL121832-3|CAC21458.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>AJ250907-1|CAB83213.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>AB061843-1|BAB79481.1| 83|Homo sapiens ribosomal protein S21
protein.
Length = 83
Score = 114 bits (274), Expect = 8e-26
Identities = 52/74 (70%), Positives = 60/74 (81%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RMGESDDCIVRLTR 257
RMGESDD I+RL +
Sbjct: 61 RMGESDDSILRLAK 74
>AL121832-2|CAC29248.1| 90|Homo sapiens ribosomal protein S21
protein.
Length = 90
Score = 97.5 bits (232), Expect = 1e-20
Identities = 44/62 (70%), Positives = 50/62 (80%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIR 215
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIR 60
Query: 216 RM 221
RM
Sbjct: 61 RM 62
>AB007157-1|BAA25821.1| 54|Homo sapiens ribosomal protein S21
protein.
Length = 54
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/54 (61%), Positives = 41/54 (75%)
Frame = +3
Query: 96 NRLIHAKDHASVQLVIADVDPATGRAADTSKMYVVCGAIRRMGESDDCIVRLTR 257
NR+I AKDHAS+Q+ +A+VD TGR K Y +CGAIRRMGESDD I+RL +
Sbjct: 1 NRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRLAK 54
>BC027976-1|AAH27976.1| 66|Homo sapiens RPS21 protein protein.
Length = 66
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 170
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>AL121832-1|CAC29247.1| 66|Homo sapiens ribosomal protein S21
protein.
Length = 66
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/45 (73%), Positives = 38/45 (84%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIADVDPATGR 170
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A+V GR
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVAEVSWEPGR 45
>X79563-1|CAA56100.2| 97|Homo sapiens 8.2 kDa differentiation
factor protein.
Length = 97
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +3
Query: 36 MQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQLVIA 146
MQNDAGEFVDLY PRKCSASNR+I AKDHAS+Q+ +A
Sbjct: 1 MQNDAGEFVDLYVPRKCSASNRIIGAKDHASIQMNVA 37
>BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3
(Drosophila) protein.
Length = 1523
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 3 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 137
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526
>AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein.
Length = 1523
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 3 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 137
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526
>AL122074-1|CAB59249.1| 333|Homo sapiens hypothetical protein
protein.
Length = 333
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 3 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 137
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 157 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 201
>AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein.
Length = 1523
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 3 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 137
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 482 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 526
>AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein.
Length = 1559
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +3
Query: 3 QFRVPCGRTYKMQNDAGEFVDLYCPRKCSASNRLIHAKDHASVQL 137
+FR Y+ + + F+DL CP KC ++ + V++
Sbjct: 518 KFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLVRI 562
>Y12790-1|CAA73326.1| 1087|Homo sapiens Supt5h protein protein.
Length = 1087
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 SVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 111
S RV++H C+T V+ T G+ RP +ST
Sbjct: 730 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>U56402-1|AAC51102.1| 1087|Homo sapiens SUPT5H protein.
Length = 1087
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 SVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 111
S RV++H C+T V+ T G+ RP +ST
Sbjct: 730 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>BC024203-1|AAH24203.1| 1087|Homo sapiens suppressor of Ty 5 homolog
(S. cerevisiae) protein.
Length = 1087
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 SVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 111
S RV++H C+T V+ T G+ RP +ST
Sbjct: 730 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>AF040253-1|AAD02179.1| 1087|Homo sapiens transcription factor
Tat-CT1 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 SVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 111
S RV++H C+T V+ T G+ RP +ST
Sbjct: 730 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
variant protein.
Length = 1116
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 SVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 111
S RV++H C+T V+ T G+ RP +ST
Sbjct: 759 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 793
>AB000516-1|BAA24075.1| 1087|Homo sapiens DSIF p160 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 7 SVYRVDVHIKCRTTPVNSLTCTARGNARPATASST 111
S RV++H C+T V+ T G+ RP +ST
Sbjct: 730 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTST 764
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,235,626
Number of Sequences: 237096
Number of extensions: 928853
Number of successful extensions: 1835
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1835
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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