Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00676
         (733 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    26   0.42 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.2  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   9.0  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   9.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.0  
AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.        21   9.0  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 25.8 bits (54), Expect = 0.42
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 232 NDLVRRAAELPSILLNSHMDVV-PVFENSWKHPPFAAEIEDNVIYARGVQDMKS 390
           NDL+ + AEL  I  ++H  +V   FE +        ++ DN  Y      MK+
Sbjct: 538 NDLLTQVAELDQIYADTHAKLVQAAFEQNTTDQSMDIDVCDNQTYTSLQMAMKN 591


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 107 RIRSVHPNVDYNECINFLKNEAEK 178
           R+ S H N  Y+E I FL+ E  K
Sbjct: 597 RLTSKHDNSLYDEYIPFLERELRK 620


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 653 GFSGTSDFHMPNYSFAIEDQVV-IVRGCDALIESEPDIHIFEDVRLN 516
           G   T+D  + + S+  +D    I +  D L+E+EP  +    V+LN
Sbjct: 175 GTLATNDNILESISYVKDDGTEGIAKSGDVLVETEPIYYNLTMVKLN 221


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 462 SVICTRRGDWWRYWNG 509
           S + T    +WRYW G
Sbjct: 561 SAVFTNYKLYWRYWQG 576


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -1

Query: 652 DFPGQVIFTCQIILSPLKTR*SSLGDATP 566
           DF     FTC +  +P+KT  S L D  P
Sbjct: 320 DFGRPATFTCNVRGNPIKTV-SWLKDGKP 347


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 623 PNYSFAIEDQVVIVRGCDALIESEPDIH 540
           P+YS  +  Q   +   D    SEP +H
Sbjct: 106 PSYSMQVPQQGASIDDSDPDPSSEPTVH 133


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 623 PNYSFAIEDQVVIVRGCDALIESEPDIH 540
           P+YS  +  Q   +   D    SEP +H
Sbjct: 554 PSYSMQVPQQGASIDDSDPDPSSEPTVH 581


>AF213011-1|AAG43567.1|   62|Apis mellifera esterase A2 protein.
          Length = 62

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 647 SGTSDFHMPNYSFAIEDQVVIV 582
           SGTS FH     + +   VV+V
Sbjct: 31  SGTSSFHEMRPDYLLPKDVVVV 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,209
Number of Sequences: 438
Number of extensions: 4785
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)