Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00675
         (740 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             113   1e-27
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.43 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.3  
EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    21   9.2  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    21   9.2  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    21   9.2  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  113 bits (273), Expect = 1e-27
 Identities = 53/55 (96%), Positives = 54/55 (98%)
 Frame = +2

Query: 575 DLYANTVLSGGTNMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSIL 739
           DLYANTVLSGGT MYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSIL
Sbjct: 67  DLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSIL 121



 Score = 91.9 bits (218), Expect = 6e-21
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = +1

Query: 379 EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 507
           EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG 43



 Score = 55.2 bits (127), Expect = 6e-10
 Identities = 24/25 (96%), Positives = 24/25 (96%)
 Frame = +3

Query: 501 LG*EACGIHETTYNSIMKCDVDIRK 575
           LG EACGIHETTYNSIMKCDVDIRK
Sbjct: 42  LGMEACGIHETTYNSIMKCDVDIRK 66


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.43
 Identities = 17/60 (28%), Positives = 26/60 (43%)
 Frame = +2

Query: 386 PPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVGSLRHPRDHI*LHHEVRRG 565
           PP    +     +  P   S LS T  ++A+ L   PR     L+  R  I +H+ + RG
Sbjct: 678 PPARSPSSQAQASQCPQTASLLSSTHSTLARSLMEGPRMTAEQLK--RTDI-IHNYIMRG 734


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/35 (25%), Positives = 17/35 (48%)
 Frame = +1

Query: 127 AVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRHP 231
           ++  +++HR        C P   +L +I + P HP
Sbjct: 62  SLTAQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHP 96


>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 187 VGDTVAGVQHDTGGTTGRVQREHGLDGDVHG 95
           VGD +A ++ D  G    +  E+G  G   G
Sbjct: 42  VGDDIAWMKFDKEGRLRAINPEYGFFGVAPG 72


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 541 LYVVSWMPQASYPRTRVGREPLGNG 467
           LY+  W+PQ    R +    P GNG
Sbjct: 127 LYLNIWVPQKYRLRHKGDGSPGGNG 151


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -2

Query: 541 LYVVSWMPQASYPRTRVGREPLGNG 467
           LY+  W+PQ    R +    P GNG
Sbjct: 127 LYLNIWVPQKYRLRHKGDGSPGGNG 151


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,153
Number of Sequences: 438
Number of extensions: 5127
Number of successful extensions: 14
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)