Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00673
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.6  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              21   9.8  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   9.8  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 111 KSTMEDEKLKEKISDSDKQTILDKCN 188
           + +++ EK+K  +S    +T+  KCN
Sbjct: 331 RCSVKREKIKISVSYPSTETLNTKCN 356


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 114 STMEDEKLKEKISDSDKQTILDKCNNTIKWLDSN 215
           +T  +EK +E+ +  D + +    NN     +SN
Sbjct: 77  TTFNEEKFRERTTKLDSEQVNRLVNNCKDITESN 110


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 167 DHPRQVQQHHQVA 205
           +HP Q QQH+  A
Sbjct: 19  EHPHQHQQHYGAA 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,624
Number of Sequences: 438
Number of extensions: 2958
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)