Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00672
         (660 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    27   0.69 
AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   2.1  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   2.8  
AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.         23   8.5  
AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.         23   8.5  
AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.         23   8.5  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 26.6 bits (56), Expect = 0.69
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +2

Query: 272 PNMYSPEKSMHML--NGGPKYTILGKTGFTKISETPAPNS 385
           P  Y  ++  H L  NGG +  +  +T   ++   PAP +
Sbjct: 151 PQQYQQQQQQHQLEHNGGREQMMKNETSIDEVPNAPAPKA 190


>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = +3

Query: 159 PAPNCYTPQKADRILHQSAPSFSMRSKDVVDKLNTPLRLTCILQKN 296
           P P  Y P +   ++   APS+ +  +     ++     TC+LQ N
Sbjct: 376 PPPPPYQPPQPYSLMASVAPSYGLPQQQNQCPIHRIQHCTCMLQNN 421


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +2

Query: 353 TKISETPAPNSYEPQKADKVLHESSPS 433
           + +S TP+P  + P+K + +  ES PS
Sbjct: 212 SSVSTTPSPEVFSPKKMENI--ESPPS 236



 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/31 (25%), Positives = 21/31 (67%)
 Frame = +3

Query: 18  RTKSEITKVHDAPAPNIYSPEKTIHSLKSGP 110
           + ++ ++ V   P+P ++SP+K + +++S P
Sbjct: 206 KARNLLSSVSTTPSPEVFSPKK-MENIESPP 235


>AF020851-1|AAC31864.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 145 STK*HRHQIAIHHKKQTEFY 204
           STK HRH    HH+++ E Y
Sbjct: 24  STK-HRHHSRHHHRRRRERY 42


>AF020850-1|AAC31863.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 145 STK*HRHQIAIHHKKQTEFY 204
           STK HRH    HH+++ E Y
Sbjct: 24  STK-HRHHSRHHHRRRRERY 42


>AF020849-1|AAC31862.1|  214|Anopheles gambiae unknown protein.
          Length = 214

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +1

Query: 145 STK*HRHQIAIHHKKQTEFY 204
           STK HRH    HH+++ E Y
Sbjct: 24  STK-HRHHSRHHHRRRRERY 42


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,331
Number of Sequences: 2352
Number of extensions: 15385
Number of successful extensions: 90
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)