Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00671X
         (587 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf (tbp-asso...    30   1.1  
AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical ...    30   1.4  
U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor staphylo...    28   4.3  
AL032632-5|CAA21585.1|  297|Caenorhabditis elegans Hypothetical ...    28   4.3  
AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical p...    27   7.5  
U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical pr...    27   7.5  
L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-lik...    27   7.5  
L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-lik...    27   7.5  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    27   7.5  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    27   7.5  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    27   9.9  

>AF125451-5|AAD12824.1| 1086|Caenorhabditis elegans Taf
           (tbp-associated transcriptionfactor) family protein 2
           protein.
          Length = 1086

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -3

Query: 156 TSFYQTWACRTSLFNCKTSPNLTHGTLPCQFKMSQN-*NEIRILNHKFDF 10
           T+ Y     R +L+N   S    H  LPC  ++ +N  N++R+L  +F +
Sbjct: 827 TNRYSDDFYRAALYNSLASSVFPHDALPCHVELPENLSNDVRVLIKEFTY 876


>AL132898-4|CAC14407.3|  968|Caenorhabditis elegans Hypothetical
           protein Y59A8B.6 protein.
          Length = 968

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 19/42 (45%), Positives = 25/42 (59%), Gaps = 5/42 (11%)
 Frame = -2

Query: 184 PSSSATSLQDFILPNMG--LQDIT---IQLQNVTEPNPRNPP 74
           P    T +Q  I+P MG  LQDI    + L++V E NPR+PP
Sbjct: 296 PKGYLTDMQS-IIPQMGGDLQDIKKARMLLKSVRETNPRHPP 336


>U40029-11|AAA81130.1|  914|Caenorhabditis elegans Tudor
           staphylococcal nuclease homologprotein 1 protein.
          Length = 914

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 13/31 (41%), Positives = 21/31 (67%)
 Frame = -2

Query: 169 TSLQDFILPNMGLQDITIQLQNVTEPNPRNP 77
           ++++ F+LPN   + IT+QL  V  P+ RNP
Sbjct: 206 STVRAFLLPNF--EYITLQLSGVRAPSTRNP 234


>AL032632-5|CAA21585.1|  297|Caenorhabditis elegans Hypothetical
           protein Y11D7A.9 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 454 AECLFKRNSYGRLRRLTDILFSPAFRTVTNLSISIHILRWSENI 585
           A  L+  N YGRL     ILF+  +   T + I+  IL W + I
Sbjct: 194 AHSLYYLNPYGRLSYYLKILFTSLYVLSTPILIASFILYWRKCI 237


>AL110482-6|CAB60339.1|  179|Caenorhabditis elegans Hypothetical
           protein Y39G8B.7 protein.
          Length = 179

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = -1

Query: 380 PSTCS-CPRALKPACPSNCSLCYP 312
           P TC+ CP A  P   SNC  C P
Sbjct: 99  PETCNMCPGATTPTPDSNCKDCSP 122


>Z82057-4|CAB61024.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 380 PSTCSCPRALKPACPSNCSLCYPT 309
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>Z81119-10|CAB61032.2|  370|Caenorhabditis elegans Hypothetical
           protein T10H4.12 protein.
          Length = 370

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 380 PSTCSCPRALKPACPSNCSLCYPT 309
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>U64856-3|AAB04987.1|  392|Caenorhabditis elegans Hypothetical
           protein T25F10.4 protein.
          Length = 392

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 492 ESSITIPFEQTFRDLSAQGNDPRRNDLTTFN 400
           +SS+ I FE  F   + +G +PR  +LTT++
Sbjct: 42  KSSLEISFEICFEWETKRGKEPRNRELTTWS 72


>L39925-1|AAA98782.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 380 PSTCSCPRALKPACPSNCSLCYPT 309
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>L39890-1|AAA98788.1|  370|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 370

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 380 PSTCSCPRALKPACPSNCSLCYPT 309
           P T +CP +  P+C + C   Y T
Sbjct: 197 PCTKNCPESTTPSCKTTCQSSYKT 220


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 198  SRSTDLQAAPPASRTSFYQTWACRTSLFNCK 106
            SRS   +AAPP  + S   TW+ +T  F  K
Sbjct: 1567 SRSRSREAAPPPQQRSRNSTWSEQTDTFLAK 1597


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -3

Query: 198 SRSTDLQAAPPASRTSFYQTWACRTSLFNCK 106
           SRS   +AAPP  + S   TW+ +T  F  K
Sbjct: 192 SRSRSREAAPPPQQRSRNSTWSEQTDTFLAK 222


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 27.1 bits (57), Expect = 9.9
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = -1

Query: 419 TTSLPSITAAAAGPSTCSCPRALKPACPSNC 327
           TT  P   A        SCP+  +P C S C
Sbjct: 505 TTQAPPAPAPQQQQQLASCPQLCQPQCTSQC 535


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,720,802
Number of Sequences: 27780
Number of extensions: 315733
Number of successful extensions: 774
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)