Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00670
(628 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0683 + 10363963-10364037,10364112-10364185,10364312-103644... 91 5e-19
05_03_0610 - 16167557-16167679,16168236-16168418,16169291-161694... 89 2e-18
02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679 40 0.001
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763... 30 1.7
12_01_0191 + 1413287-1413346,1413504-1413632,1416819-1416998,141... 29 2.3
05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778 29 3.0
03_02_0488 - 8824980-8825267,8825364-8827775 28 5.3
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 7.0
03_04_0228 - 18989688-18989807,18990300-18990345,18990452-189905... 27 9.2
>03_02_0683 +
10363963-10364037,10364112-10364185,10364312-10364435,
10365047-10365229,10365478-10365600
Length = 192
Score = 91.5 bits (217), Expect = 5e-19
Identities = 46/94 (48%), Positives = 66/94 (70%)
Frame = +2
Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
K+ K VV V R+I+ P + V +RPR+RTLT+V+D ILED+V+PAEIVGKRI
Sbjct: 86 KKFSGKDVVIVATRRIVRPPKKGSAV----QRPRTRTLTAVHDGILEDVVYPAEIVGKRI 141
Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFSLYTR 523
R +LDG+++IK+ LD ++ E+K++TFS R
Sbjct: 142 RYRLDGAKVIKIFLDPKERNNTEYKLETFSAVYR 175
Score = 77.8 bits (183), Expect = 7e-15
Identities = 38/80 (47%), Positives = 57/80 (71%), Gaps = 2/80 (2%)
Frame = +3
Query: 21 KASGAEADSFETSISQALVELET-NSDLKAQLRELYITKAKEIELX-NXKSIIIYVPMPK 194
K G E FE S++QA +LE N +LK++L++LYI A ++++ N K+++I+VP
Sbjct: 10 KEKGLEPSEFEDSVAQAFFDLENGNQELKSELKDLYINNAVQMDIAGNRKAVVIHVPYRL 69
Query: 195 LKAYQKIQIRLVRELEKKFS 254
KA++KI +RLVRELEKKFS
Sbjct: 70 RKAFKKIHVRLVRELEKKFS 89
>05_03_0610 -
16167557-16167679,16168236-16168418,16169291-16169414,
16169514-16169626,16169668-16169742
Length = 205
Score = 89.4 bits (212), Expect = 2e-18
Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Frame = +2
Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
K+ K VV V R+I+ P + V RPR+RTLT+V+D ILED+V+PAEIVGKR+
Sbjct: 99 KKFSGKDVVLVATRRIVRPPKKGSAVV----RPRTRTLTAVHDGILEDVVYPAEIVGKRV 154
Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF-SLYTR 523
R LDG +++K+ LD ++ E+K+DTF S+Y R
Sbjct: 155 RYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRR 189
Score = 68.5 bits (160), Expect = 4e-12
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
Frame = +3
Query: 66 QALVELET-NSDLKAQLRELYITKAKEIELX-NXKSIIIYVPMPKLKAYQKIQIRLVREL 239
QA +LE N +LK+ L++LYI A +++L N K++IIYVP KAY+KI +RLVREL
Sbjct: 38 QAFFDLENGNQELKSDLKDLYINGAVQMDLPGNRKAVIIYVPYRLRKAYKKIHVRLVREL 97
Query: 240 EKKFS 254
EKKFS
Sbjct: 98 EKKFS 102
>02_02_0695 - 13024639-13024800,13025425-13025607,13025635-13025679
Length = 129
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +3
Query: 120 LYITKAKEIELXNXKSIIIYVPMPKLKAYQKIQIRLVRELEKKFS 254
+Y+ ++ N K ++I+V KA++KI +RLV+ELEKKFS
Sbjct: 31 MYVCSQMDVAA-NWKVVVIHVLYHLCKAFKKIHVRLVKELEKKFS 74
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/57 (38%), Positives = 34/57 (59%)
Frame = +2
Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVG 412
K+ K VVF R+I+ +P +K + PR+RTL +V+D ILED+V ++G
Sbjct: 71 KKFSGKDVVFDATRRIV-RPLNKGSAVH---HPRTRTLITVHDGILEDVVSQLRLLG 123
>06_01_0983 -
7630651-7630683,7630717-7630942,7630993-7631234,
7631502-7631591,7631680-7631845,7632225-7633191,
7633402-7633591,7633908-7634048,7634416-7634736
Length = 791
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 389 VFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHK 496
+FPA I G + KLD ++L K H D+ + ++HK
Sbjct: 589 IFPARIGGYLLDSKLDRNEL-KKHFDQTRANRLDHK 623
>12_01_0191 +
1413287-1413346,1413504-1413632,1416819-1416998,
1417747-1417938,1418533-1418673,1418785-1418912,
1419088-1419262,1419664-1419852,1420628-1420749,
1420829-1420874
Length = 453
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 338 PRSRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIK 454
P +RTLT+ +D IL+D + A+I GK + + + +IK
Sbjct: 86 PNTRTLTNAHDGILDD-INCAQIAGKHVGDHSNCANVIK 123
>05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778
Length = 1104
Score = 29.1 bits (62), Expect = 3.0
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = -2
Query: 519 VYRLKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKSSRI--ASYTEVNVL 346
++ LK T+ + WF ++ L+RLP S G+ S R S + V L
Sbjct: 557 LHSLKFGTILMFEITWFNQLSNILFLSLKGCMLVRLPE-SIGELHSLRYLDISRSHVQEL 615
Query: 345 ERGLFCLLATRVL 307
L+CL +VL
Sbjct: 616 PEKLWCLYCLQVL 628
>03_02_0488 - 8824980-8825267,8825364-8827775
Length = 899
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 21 KASGAEADSFETSISQALVELETNSDL 101
++SG + FET +S A++E+E N+ L
Sbjct: 305 QSSGVTGEVFETLVSSAVMEMERNASL 331
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 7.0
Identities = 21/95 (22%), Positives = 44/95 (46%)
Frame = +3
Query: 9 TKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYVPM 188
+++I SGA + + S L +L + Q ++YITK +++ K+ IY+P
Sbjct: 320 SENIARSGAREANQKVCKSVILKDLYQEMERMKQGSQVYITKLSDVKAAREKN-GIYIPQ 378
Query: 189 PKLKAYQKIQIRLVRELEKKFSVNM*SLLETVRSC 293
+ A ++ + + +R+ + L + SC
Sbjct: 379 ERF-ALEEAEKKTMRDKIEYLETQNKELKMNIESC 412
>03_04_0228 -
18989688-18989807,18990300-18990345,18990452-18990552,
18990624-18990702,18990788-18990868,18991440-18991502,
18994171-18994246,18994980-18995246,18995994-18996076,
18996792-18996922,18997043-18997174
Length = 392
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 325 QTKEATLKDIDLCVRCYPRGLG 390
Q ++++LK CVRC+P G G
Sbjct: 184 QKRDSSLKYQTRCVRCFPNGTG 205
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,575,585
Number of Sequences: 37544
Number of extensions: 279969
Number of successful extensions: 682
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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