Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00670
         (628 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p pro...   153   2e-37
AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD...   153   2e-37
AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC...   153   2e-37
AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA...   153   2e-37
BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p pro...   146   2e-35
AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB...   146   2e-35
AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p pro...    33   0.32 
AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA...    33   0.32 
X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei...    29   6.8  
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me...    29   6.8  
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA...    29   6.8  

>AY071156-1|AAL48778.1|  194|Drosophila melanogaster RE18653p
           protein.
          Length = 194

 Score =  153 bits (371), Expect = 2e-37
 Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +2

Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
           K+   KHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF-SLYTR 523
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF S+Y +
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKK 177



 Score =  110 bits (264), Expect = 2e-24
 Identities = 53/84 (63%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   MSTKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYV 182
           + +K IK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  + K++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAYQKIQIRLVRELEKKFS 254
           P+P+ K +QKIQI LVRELEKKFS
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFS 86



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 511 SVYKKLTGREVTFEFPEPYL 570
           SVYKKLTGR+VTFEFP+ YL
Sbjct: 173 SVYKKLTGRDVTFEFPDNYL 192


>AE014297-4564|AAS65232.1|  194|Drosophila melanogaster CG1883-PD,
           isoform D protein.
          Length = 194

 Score =  153 bits (371), Expect = 2e-37
 Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +2

Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
           K+   KHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF-SLYTR 523
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF S+Y +
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKK 177



 Score =  110 bits (264), Expect = 2e-24
 Identities = 53/84 (63%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   MSTKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYV 182
           + +K IK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  + K++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAYQKIQIRLVRELEKKFS 254
           P+P+ K +QKIQI LVRELEKKFS
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFS 86



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 511 SVYKKLTGREVTFEFPEPYL 570
           SVYKKLTGR+VTFEFP+ YL
Sbjct: 173 SVYKKLTGRDVTFEFPDNYL 192


>AE014297-4563|AAN14224.1|  194|Drosophila melanogaster CG1883-PC,
           isoform C protein.
          Length = 194

 Score =  153 bits (371), Expect = 2e-37
 Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +2

Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
           K+   KHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF-SLYTR 523
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF S+Y +
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKK 177



 Score =  110 bits (264), Expect = 2e-24
 Identities = 53/84 (63%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   MSTKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYV 182
           + +K IK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  + K++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAYQKIQIRLVRELEKKFS 254
           P+P+ K +QKIQI LVRELEKKFS
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFS 86



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 511 SVYKKLTGREVTFEFPEPYL 570
           SVYKKLTGR+VTFEFP+ YL
Sbjct: 173 SVYKKLTGRDVTFEFPDNYL 192


>AE014297-4562|AAF57023.1|  194|Drosophila melanogaster CG1883-PA,
           isoform A protein.
          Length = 194

 Score =  153 bits (371), Expect = 2e-37
 Identities = 75/95 (78%), Positives = 83/95 (87%), Gaps = 1/95 (1%)
 Frame = +2

Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
           K+   KHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTF-SLYTR 523
           RVKLDGSQL+KVHLDKNQQTTIEHKVDTF S+Y +
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVDTFTSVYKK 177



 Score =  110 bits (264), Expect = 2e-24
 Identities = 53/84 (63%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   MSTKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYV 182
           + +K IK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  + K++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAYQKIQIRLVRELEKKFS 254
           P+P+ K +QKIQI LVRELEKKFS
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFS 86



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 17/20 (85%), Positives = 19/20 (95%)
 Frame = +1

Query: 511 SVYKKLTGREVTFEFPEPYL 570
           SVYKKLTGR+VTFEFP+ YL
Sbjct: 173 SVYKKLTGRDVTFEFPDNYL 192


>BT023903-1|ABA81837.1|  250|Drosophila melanogaster GM06992p
           protein.
          Length = 250

 Score =  146 bits (354), Expect = 2e-35
 Identities = 71/94 (75%), Positives = 79/94 (84%)
 Frame = +2

Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
           K+   KHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFSLYTR 523
           RVKLDGSQL+KVHLDKNQQTTIEHKV    L+ +
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVSISILHLK 176



 Score =  110 bits (264), Expect = 2e-24
 Identities = 53/84 (63%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   MSTKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYV 182
           + +K IK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  + K++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAYQKIQIRLVRELEKKFS 254
           P+P+ K +QKIQI LVRELEKKFS
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFS 86


>AE014297-4565|AAN14225.1|  250|Drosophila melanogaster CG1883-PB,
           isoform B protein.
          Length = 250

 Score =  146 bits (354), Expect = 2e-35
 Identities = 71/94 (75%), Positives = 79/94 (84%)
 Frame = +2

Query: 242 KEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGKRI 421
           K+   KHVV + +RKILPKP+ K R   KQKRPRSRTLT+VYDAILEDLVFPAEIVGKRI
Sbjct: 83  KKFSGKHVVVIAERKILPKPTRKARNPLKQKRPRSRTLTAVYDAILEDLVFPAEIVGKRI 142

Query: 422 RVKLDGSQLIKVHLDKNQQTTIEHKVDTFSLYTR 523
           RVKLDGSQL+KVHLDKNQQTTIEHKV    L+ +
Sbjct: 143 RVKLDGSQLVKVHLDKNQQTTIEHKVSISILHLK 176



 Score =  110 bits (264), Expect = 2e-24
 Identities = 53/84 (63%), Positives = 68/84 (80%)
 Frame = +3

Query: 3   MSTKSIKASGAEADSFETSISQALVELETNSDLKAQLRELYITKAKEIELXNXKSIIIYV 182
           + +K IK  G++ D FE SI+QALVELE NSDLK  LR+L+IT+A+EIE  + K++IIYV
Sbjct: 3   IGSKIIKPGGSDPDDFEKSIAQALVELEANSDLKPYLRDLHITRAREIEFGSKKAVIIYV 62

Query: 183 PMPKLKAYQKIQIRLVRELEKKFS 254
           P+P+ K +QKIQI LVRELEKKFS
Sbjct: 63  PIPQQKVFQKIQIILVRELEKKFS 86


>AY118620-1|AAM49989.1| 1394|Drosophila melanogaster LP11788p protein.
          Length = 1394

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
 Frame = +2

Query: 236  ARKEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI---LEDLVFPAEI 406
            A  ++Q  HV   GDR+    P     +         R++ + YD I   L+ L+    +
Sbjct: 1192 AGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRRELQQLLGGESV 1251

Query: 407  VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 502
               R++   DGS +++  L    +  +   ++
Sbjct: 1252 ENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1283


>AE014297-4145|AAF56722.1| 1511|Drosophila melanogaster CG5639-PA
            protein.
          Length = 1511

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 3/92 (3%)
 Frame = +2

Query: 236  ARKEVQCKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAI---LEDLVFPAEI 406
            A  ++Q  HV   GDR+    P     +         R++ + YD I   L+ L+    +
Sbjct: 1309 AGNQLQSTHVFGAGDRRCSHVPIEAVAIELHLTNSSGRSIRNAYDTIRRELQQLLGGESV 1368

Query: 407  VGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVD 502
               R++   DGS +++  L    +  +   ++
Sbjct: 1369 ENLRVQENFDGSAIVRFELHNEAKVDLAFAIE 1400


>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
            protein.
          Length = 1408

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 131  CNVKLPKLGFEVGVGFEFDQRLRDRGLEGIRLSTASFDALR 9
            C V +  +GF V +   + QRL  R   G+ L T S DALR
Sbjct: 1229 CGVFIVLVGFSVFISLYWKQRLAYRTSSGMNL-TPSLDALR 1268


>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
            D.melanogaster serrate(Ser) mRNA, complete cds. ).
          Length = 1404

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 131  CNVKLPKLGFEVGVGFEFDQRLRDRGLEGIRLSTASFDALR 9
            C V +  +GF V +   + QRL  R   G+ L T S DALR
Sbjct: 1225 CGVFIVLVGFSVFISLYWKQRLAYRTSSGMNL-TPSLDALR 1264


>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
            protein.
          Length = 1407

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -3

Query: 131  CNVKLPKLGFEVGVGFEFDQRLRDRGLEGIRLSTASFDALR 9
            C V +  +GF V +   + QRL  R   G+ L T S DALR
Sbjct: 1228 CGVFIVLVGFSVFISLYWKQRLAYRTSSGMNL-TPSLDALR 1267


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,513,557
Number of Sequences: 53049
Number of extensions: 475730
Number of successful extensions: 1076
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1022
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)