Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00668X
         (501 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              34   7e-04
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   4.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   5.5  
AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein pro...    21   5.5  
AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding pr...    21   5.5  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   9.5  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   9.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.5  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 34.3 bits (75), Expect = 7e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 157 PCLKVHCSAGRVCEINEHGD-AMCNCIKDCPYETTPDAWCAQTSTKPGNRIAKYTASDAY 333
           PC   +C  G+ CE++ +   A+C C++ CP    P   CA       N    + A+   
Sbjct: 81  PCASKYCGIGKECELSPNSTIAVCVCMRKCPRRHRP--VCASNGKIYANHCELHRAACHS 138

Query: 334 ASTTLISAVVR 366
            S+   S ++R
Sbjct: 139 GSSLTKSRLMR 149


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 200 STNTETPCVTASRTVPTRRLQ 262
           ++N      T + T+PTRRL+
Sbjct: 247 TSNATAAMTTGTTTIPTRRLR 267


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 387 EYYGTCREMPDCTESEMSDFPRRMRD 464
           +Y    + MPD  E+E+SD    +RD
Sbjct: 74  QYARVQQSMPDGWETEISDQMLELRD 99


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = +1

Query: 187 RVCEINEHGDAMCNCI 234
           +VC    H D+ C C+
Sbjct: 344 QVCRSRRHSDSCCLCL 359


>AF134817-1|AAD40233.1|  105|Apis mellifera FABP-like protein
           protein.
          Length = 105

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 361 PRH*SELSRHKHRWRYTSQS 302
           PR   ELS++   W +TS S
Sbjct: 33  PRPSFELSKNGDEWTFTSSS 52


>AB083011-1|BAC54132.1|  135|Apis mellifera fatty acid binding
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 361 PRH*SELSRHKHRWRYTSQS 302
           PR   ELS++   W +TS S
Sbjct: 35  PRPSFELSKNGDEWTFTSSS 54


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 500 TFSHVAHDVKKPVPHATGEVRH 435
           +FSH + DVK  +  ATG   H
Sbjct: 278 SFSHRSIDVKDGIVLATGITVH 299


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 500 TFSHVAHDVKKPVPHATGEVRH 435
           +FSH + DVK  +  ATG   H
Sbjct: 278 SFSHRSIDVKDGIVLATGITVH 299


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 22  QPPRCPR 2
           QPP+CPR
Sbjct: 564 QPPQCPR 570


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.128    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,819
Number of Sequences: 438
Number of extensions: 2381
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)