Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00662
         (832 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical...    32   0.44 
Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical pr...    29   3.1  
AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine rece...    29   4.1  
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical...    29   4.1  
AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical...    28   7.1  

>AL132876-17|CAC48140.1|  934|Caenorhabditis elegans Hypothetical
           protein Y105E8A.21 protein.
          Length = 934

 Score = 32.3 bits (70), Expect = 0.44
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +3

Query: 300 PEDVFKLSLMQHMAAQFINLQAINRSKNRKQFMMALSFYTNHMSLFWDPDTC 455
           P+D  KLS     A Q   L A+ ++K   + ++    YTNHMS+ +  D C
Sbjct: 192 PDDFRKLS---KKAKQAYTLDAVTKNKGIVKCLVCDKEYTNHMSIIYHIDRC 240


>Z69792-5|CAA93668.3| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 513 NYFTPNCQMRWREKYLNSSSSRSMTICA 596
           N +  +C++RW  K+L  +  ++ T+CA
Sbjct: 195 NPWNCDCRLRWMRKWLEKAEGQNKTVCA 222


>AL022270-3|CAB63434.2| 1410|Caenorhabditis elegans Hypothetical
           protein F40E10.4 protein.
          Length = 1410

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 513 NYFTPNCQMRWREKYLNSSSSRSMTICA 596
           N +  +C++RW  K+L  +  ++ T+CA
Sbjct: 195 NPWNCDCRLRWMRKWLEKAEGQNKTVCA 222


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)
 Frame = +1

Query: 91  GKELKCLQALNLQNNRHVITELKMNFSSFMEGLVNKE 201
           G  ++ + + +L +NRH IT      +S ME L+NKE
Sbjct: 61  GNNIEYISSASLISNRHFITSAFSILNSQMEWLMNKE 97


>U41995-1|AAA83459.1|  301|Caenorhabditis elegans Serpentine
           receptor, class x protein47 protein.
          Length = 301

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 664 LHFFYIHV-NSCSNSCFIRSIVQFAQIVIL-RLDELFKYFSLHLIWQ 530
           LH F  HV NSC N  F     ++  I+IL  L +LF  +   L  Q
Sbjct: 151 LHMFMYHVSNSCVNFSFYGIFCKYLTIIILILLIDLFSIYKARLFLQ 197


>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
            protein T05H4.3 protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 10   ASTYFDSKRQKIPNV--IDEEKNKFIQYLGKELKCLQALNLQNNR 138
            A + FD     +PN+  +D   N     + + LK L +LNLQNN+
Sbjct: 941  ALSRFDCSLFDLPNLESVDLSNNSIKTIIRRPLKTLTSLNLQNNK 985


>AL031627-15|CAA20966.1|  318|Caenorhabditis elegans Hypothetical
           protein Y102A5C.25 protein.
          Length = 318

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -3

Query: 188 KPSMKLEKFILSSVITCLLFC-RFNAWRHFSSLPKYWMNLF 69
           K S  + K++   +I   + C  F+AW++ +    YW+NLF
Sbjct: 141 KSSQNIIKYLYFLIIVKEVSCDMFSAWKYQTVQNVYWINLF 181


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,331,305
Number of Sequences: 27780
Number of extensions: 374827
Number of successful extensions: 1111
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)