Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00661
(569 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 158 4e-39
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 158 4e-39
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 158 4e-39
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 158 4e-39
AY070526-1|AAL47997.1| 647|Drosophila melanogaster GH27708p pro... 33 0.36
AE014296-1332|AAN12025.1| 647|Drosophila melanogaster CG17888-P... 33 0.36
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 30 1.9
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 30 1.9
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 30 1.9
BT016067-1|AAV36952.1| 626|Drosophila melanogaster LP07963p pro... 29 3.3
AY060996-1|AAL28544.1| 221|Drosophila melanogaster HL01241p pro... 29 3.3
AE014297-783|AAN13394.1| 580|Drosophila melanogaster CG8036-PD,... 29 3.3
AE014297-782|AAN13393.2| 626|Drosophila melanogaster CG8036-PC,... 29 3.3
AE014297-781|AAF54265.3| 626|Drosophila melanogaster CG8036-PB,... 29 3.3
AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-P... 29 4.4
AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-P... 29 4.4
X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein. 29 5.8
BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p pro... 29 5.8
BT003274-1|AAO25031.1| 313|Drosophila melanogaster LD15419p pro... 29 5.8
AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p pro... 29 5.8
AY069686-1|AAL39831.1| 570|Drosophila melanogaster LD45776p pro... 29 5.8
AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p pro... 29 5.8
AF328906-1|AAK82338.1| 570|Drosophila melanogaster stromal inte... 29 5.8
AE014298-2291|AAF48542.2| 570|Drosophila melanogaster CG9126-PA... 29 5.8
AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA... 29 5.8
AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB... 29 5.8
AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA... 29 5.8
AF434686-1|AAL28130.1| 1573|Drosophila melanogaster guanine nucl... 28 7.7
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 158 bits (384), Expect = 4e-39
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 256 ESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAY 435
+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K Y
Sbjct: 176 DSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPY 235
Query: 436 ISLPRGKGIRLTIAEERDKRIAAK 507
ISLP+GKG++L+IAEERDKR+AAK
Sbjct: 236 ISLPKGKGVKLSIAEERDKRLAAK 259
Score = 140 bits (338), Expect = 2e-33
Identities = 62/88 (70%), Positives = 72/88 (81%)
Frame = +2
Query: 2 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 181
++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYP
Sbjct: 91 TLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYP 150
Query: 182 DPLIKVNDSIQLDIATTKIMDFIKLSPG 265
DPLI NDS+Q+DIA+ KI D+IK G
Sbjct: 151 DPLIHANDSVQVDIASGKITDYIKFDSG 178
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 158 bits (384), Expect = 4e-39
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 256 ESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAY 435
+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K Y
Sbjct: 176 DSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPY 235
Query: 436 ISLPRGKGIRLTIAEERDKRIAAK 507
ISLP+GKG++L+IAEERDKR+AAK
Sbjct: 236 ISLPKGKGVKLSIAEERDKRLAAK 259
Score = 140 bits (338), Expect = 2e-33
Identities = 62/88 (70%), Positives = 72/88 (81%)
Frame = +2
Query: 2 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 181
++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYP
Sbjct: 91 TLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYP 150
Query: 182 DPLIKVNDSIQLDIATTKIMDFIKLSPG 265
DPLI NDS+Q+DIA+ KI D+IK G
Sbjct: 151 DPLIHANDSVQVDIASGKITDYIKFDSG 178
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 158 bits (384), Expect = 4e-39
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 256 ESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAY 435
+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K Y
Sbjct: 176 DSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPY 235
Query: 436 ISLPRGKGIRLTIAEERDKRIAAK 507
ISLP+GKG++L+IAEERDKR+AAK
Sbjct: 236 ISLPKGKGVKLSIAEERDKRLAAK 259
Score = 140 bits (338), Expect = 2e-33
Identities = 62/88 (70%), Positives = 72/88 (81%)
Frame = +2
Query: 2 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 181
++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYP
Sbjct: 91 TLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYP 150
Query: 182 DPLIKVNDSIQLDIATTKIMDFIKLSPG 265
DPLI NDS+Q+DIA+ KI D+IK G
Sbjct: 151 DPLIHANDSVQVDIASGKITDYIKFDSG 178
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 158 bits (384), Expect = 4e-39
Identities = 71/84 (84%), Positives = 79/84 (94%)
Frame = +1
Query: 256 ESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTFATRLNNVFIIGKGTKAY 435
+SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH FATRL NVFIIGKG K Y
Sbjct: 176 DSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNKPY 235
Query: 436 ISLPRGKGIRLTIAEERDKRIAAK 507
ISLP+GKG++L+IAEERDKR+AAK
Sbjct: 236 ISLPKGKGVKLSIAEERDKRLAAK 259
Score = 140 bits (338), Expect = 2e-33
Identities = 62/88 (70%), Positives = 72/88 (81%)
Frame = +2
Query: 2 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 181
++EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKVK+ G K VP+LVTHDGRTIRYP
Sbjct: 91 TLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKVKKTQLGAKGVPFLVTHDGRTIRYP 150
Query: 182 DPLIKVNDSIQLDIATTKIMDFIKLSPG 265
DPLI NDS+Q+DIA+ KI D+IK G
Sbjct: 151 DPLIHANDSVQVDIASGKITDYIKFDSG 178
>AY070526-1|AAL47997.1| 647|Drosophila melanogaster GH27708p
protein.
Length = 647
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHH 473
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHH 180
>AE014296-1332|AAN12025.1| 647|Drosophila melanogaster CG17888-PD,
isoform D protein.
Length = 647
Score = 32.7 bits (71), Expect = 0.36
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +3
Query: 309 HHRVPRETSRLLRHCAH-QGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHP--PHH 473
HH+ ++ + +H H Q H H +H ++Q+ +Q H GHP PHH
Sbjct: 123 HHQQQQQHQQQQQHQQHLQQHHQAHHQHVLQQQQQQQQQHSQHQHQQQHHGHPLHPHH 180
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipped-B
protein.
Length = 2077
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 169 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRRDTVDCESALNIID*TKQFISL 11
G ++RY + I +S R +LD+ +V + LR+DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 169 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRRDTVDCESALNIID*TKQFISL 11
G ++RY + I +S R +LD+ +V + LR+DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = -2
Query: 169 GAAIMRY-QVRNILRSGRH-TLDFTQLVLSLLRRDTVDCESALNIID*TKQFISL 11
G ++RY + I +S R +LD+ +V + LR+DTV+ +NIID Q I L
Sbjct: 888 GTMLVRYVSDKGIEQSIRLVSLDYLGIVAARLRKDTVESRCRVNIIDSMIQSIKL 942
>BT016067-1|AAV36952.1| 626|Drosophila melanogaster LP07963p
protein.
Length = 626
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 125 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLS-PGTCV 274
G +++ T G TI YP + +++L A TK + FI+ S P TCV
Sbjct: 434 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 483
>AY060996-1|AAL28544.1| 221|Drosophila melanogaster HL01241p
protein.
Length = 221
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 125 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLS-PGTCV 274
G +++ T G TI YP + +++L A TK + FI+ S P TCV
Sbjct: 29 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 78
>AE014297-783|AAN13394.1| 580|Drosophila melanogaster CG8036-PD,
isoform D protein.
Length = 580
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 125 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLS-PGTCV 274
G +++ T G TI YP + +++L A TK + FI+ S P TCV
Sbjct: 388 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 437
>AE014297-782|AAN13393.2| 626|Drosophila melanogaster CG8036-PC,
isoform C protein.
Length = 626
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 125 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLS-PGTCV 274
G +++ T G TI YP + +++L A TK + FI+ S P TCV
Sbjct: 434 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 483
>AE014297-781|AAF54265.3| 626|Drosophila melanogaster CG8036-PB,
isoform B protein.
Length = 626
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 125 GPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKLS-PGTCV 274
G +++ T G TI YP + +++L A TK + FI+ S P TCV
Sbjct: 434 GLEDIAMFRTIPGSTIFYPSDAVSTERAVEL-AANTKGVCFIRTSRPNTCV 483
>AE014298-1457|AAN09261.3| 2309|Drosophila melanogaster CG17255-PB,
isoform B protein.
Length = 2309
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 348 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPH 470
H HQ H H +H +Q+ H+R H G H + GH H
Sbjct: 310 HHQHQQHHQQHQQHHHQQQQHHRDYHHG-H--GRQYGHHSH 347
>AE014298-1456|AAF46591.4| 2309|Drosophila melanogaster CG17255-PA,
isoform A protein.
Length = 2309
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +3
Query: 348 HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPH 470
H HQ H H +H +Q+ H+R H G H + GH H
Sbjct: 310 HHQHQQHHQQHQQHHHQQQQHHRDYHHG-H--GRQYGHHSH 347
>X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein.
Length = 606
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H + + +Q+ H++Q H+AAA+Q HH
Sbjct: 480 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 511
>BT023940-1|ABB36444.1| 592|Drosophila melanogaster LP20233p
protein.
Length = 592
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/60 (28%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 297 GACGHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
G G+H P H H H H H HN GH H + G PH+
Sbjct: 349 GDKGYHHYPPHNHGGHNHGGHNNHHPPHNGEHNHNHPPHNHGGHGHHHPSHNHGGQDPHN 408
>BT003274-1|AAO25031.1| 313|Drosophila melanogaster LD15419p
protein.
Length = 313
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H + + +Q+ H++Q H+AAA+Q HH
Sbjct: 187 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 218
>AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p
protein.
Length = 634
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H + + +Q+ H++Q H+AAA+Q HH
Sbjct: 508 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 539
>AY069686-1|AAL39831.1| 570|Drosophila melanogaster LD45776p
protein.
Length = 570
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H HE Q +HN Q H+AA+ G H
Sbjct: 55 HSSHESGQSLHNSQSEHVTHIAASHAGSGGEH 86
>AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p
protein.
Length = 606
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H + + +Q+ H++Q H+AAA+Q HH
Sbjct: 480 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 511
>AF328906-1|AAK82338.1| 570|Drosophila melanogaster stromal
interaction molecule-likeprotein STIM protein.
Length = 570
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H HE Q +HN Q H+AA+ G H
Sbjct: 55 HSSHESGQSLHNSQSEHVTHIAASHAGSGGEH 86
>AE014298-2291|AAF48542.2| 570|Drosophila melanogaster CG9126-PA,
isoform A protein.
Length = 570
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H HE Q +HN Q H+AA+ G H
Sbjct: 55 HSSHESGQSLHNSQSEHVTHIAASHAGSGGEH 86
>AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA,
isoform A protein.
Length = 606
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H + + +Q+ H++Q H+AAA+Q HH
Sbjct: 480 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 511
>AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB,
isoform B protein.
Length = 634
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 378 HLRHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
H + + +Q+ H++Q H+AAA+Q HH
Sbjct: 508 HHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 539
>AE014297-2291|AAF55377.2| 594|Drosophila melanogaster CG5225-PA
protein.
Length = 594
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/60 (28%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 297 GACGHHRVPRETSRLLRHCAHQGLHGTHL-RHEVEQRVHNRQGHEGVHLAAARQGHPPHH 473
G G+H P H H H H H HN GH H + G PH+
Sbjct: 351 GDKGYHHYPPHNHGGHNHGGHNNHHPPHNGEHNHNHPPHNHGGHGHHHPSHNHGGQDPHN 410
>AF434686-1|AAL28130.1| 1573|Drosophila melanogaster guanine
nucleotide exchange factor protein.
Length = 1573
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +1
Query: 205 FHPVRHCNYEDYGLHQVESGNLCMITGGRNLGRVGT 312
++ ++H E+ H+ E+G + M+T R++G VGT
Sbjct: 224 YYRIQHQGEENTRRHEDENGFVVMVTELRSIGGVGT 259
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,753,146
Number of Sequences: 53049
Number of extensions: 642499
Number of successful extensions: 2064
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -