Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00659
(706 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 96 4e-21
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 52 8e-08
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 45 1e-05
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 40 5e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 36 0.007
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 31 0.21
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 30 0.37
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.37
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.37
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 29 0.86
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 27 2.0
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 2.6
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo... 26 6.0
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 8.0
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 25 8.0
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 25 8.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 96.3 bits (229), Expect = 4e-21
Identities = 46/76 (60%), Positives = 57/76 (75%), Gaps = 1/76 (1%)
Frame = +3
Query: 255 AVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 431
A APIERVKLL+Q Q + + RYKGI + F R E+G++S WRGN ANV+RYFP
Sbjct: 44 AAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFP 103
Query: 432 TQALNFAFKDKYKQVF 479
TQALNFAFKDK+K++F
Sbjct: 104 TQALNFAFKDKFKKMF 119
Score = 57.6 bits (133), Expect = 2e-09
Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Frame = +2
Query: 494 QEDAVWRYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADV--GKGDGQREFSGLGNCIS 667
+ D ++F SL FVY LD+ARTRLA D K G+R+F+GL +
Sbjct: 124 ERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYR 183
Query: 668 KIFKSDGLIGLYR 706
K ++SDGL GLYR
Sbjct: 184 KTYRSDGLRGLYR 196
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 306 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 485
S + ++++ G+VD + + + GL +RG +V+ + L F D K V L
Sbjct: 166 SAKKGGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLV 225
Query: 486 G 488
G
Sbjct: 226 G 226
Score = 27.9 bits (59), Expect = 1.5
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 205 FAKDFLAGGISAAVSKT 255
F DF+ GG+SAAVSKT
Sbjct: 27 FFFDFMMGGVSAAVSKT 43
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 52.0 bits (119), Expect = 8e-08
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +3
Query: 255 AVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 434
AV+P+ER+K++ QVQ+ ++ Y + V+I +GL+ F+RGN N +R FP
Sbjct: 37 AVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPY 89
Query: 435 QALNFAFKDKYKQ 473
A+ FA + KQ
Sbjct: 90 GAVQFATFNMLKQ 102
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 333 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 449
YK I A I K +G+ F+RG +N+++ P ++ +
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 44.8 bits (101), Expect = 1e-05
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = +3
Query: 249 QDAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 428
+ VAP++RVK+L Q H S + A R+ G+ A I GL ++G+ A + R F
Sbjct: 32 KSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYRVF 90
Query: 429 PTQALNFAFKDKYKQVFLGGVDKKT 503
P + F ++ ++V + + +T
Sbjct: 91 PYAGIKFVAYEQVRRVLIRDPEHET 115
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 39.5 bits (88), Expect = 5e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +2
Query: 572 VYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 706
+YPLD +TR+ VGK D ++G +C+ KI K++G LYR
Sbjct: 26 LYPLDVVKTRMQLSVGKSD----YNGTFDCLKKIVKNEGPHRLYR 66
Score = 34.3 bits (75), Expect = 0.017
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 AVAPIERVKLL--LQVQHVSKQIAADQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 425
AVA I V L L V Q++ + Y G D +I K +G +RG ++
Sbjct: 16 AVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILME 75
Query: 426 FPTQALNFAFKDKYKQVF 479
P +AL FA D Y +++
Sbjct: 76 APKRALKFASNDTYSKLW 93
Score = 31.5 bits (68), Expect = 0.12
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 258 VAPIERVKLLLQ-VQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 434
V P E +K+ LQ V++ SK Y G VD F +I K++ +L+ + G A + R+
Sbjct: 122 VVPFELMKIRLQDVKNASK-------YNGTVDCFTKIVKQERILALYNGFEATMWRHVVW 174
Query: 435 QALNFAFKDKYK 470
A F K +
Sbjct: 175 NAGYFGVIQKIR 186
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 35.5 bits (78), Expect = 0.007
Identities = 18/72 (25%), Positives = 35/72 (48%)
Frame = +3
Query: 258 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 437
V P+ ++ LQ Q S A Y G +D F + K +G ++G N+++ P+
Sbjct: 353 VFPLNVIRTRLQTQGTSAHPAT---YDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSV 409
Query: 438 ALNFAFKDKYKQ 473
A+++ + K+
Sbjct: 410 AISYLVYENCKK 421
Score = 27.1 bits (57), Expect = 2.6
Identities = 21/95 (22%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +3
Query: 219 PGWRYLRRSLQDAVA-----PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVR-IPKEQG 380
P + YL + +VA P++ +K +Q +S+ Q K I+ + + + K G
Sbjct: 228 PLYSYLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVG 283
Query: 381 LLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 485
+ ++RG ++ FP A + + K+ ++G
Sbjct: 284 IRGYYRGVLVGILGMFPYSATDLGTFEGLKRTWIG 318
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 30.7 bits (66), Expect = 0.21
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 443
PI+ VK +Q ++A + YK + +I + GLL FW G + R + +
Sbjct: 223 PIDTVKSRMQ------SLSASKEYKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGI 276
Query: 444 NFAFKDKYKQV 476
F +K ++
Sbjct: 277 VFTVYEKVMEI 287
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 29.9 bits (64), Expect = 0.37
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +2
Query: 566 CFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGLIGLYR 706
C+ PL+ AR + + + KG Q G+ I I+K++G+ GLYR
Sbjct: 220 CWNQPLEVARVEMQS-LTKGI-QHSSPGIMQTIMSIYKNNGIKGLYR 264
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 29.9 bits (64), Expect = 0.37
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 306 SKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 449
S I +Y G++ F + EQG++ + G A+++R P + F
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILF 350
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.9 bits (64), Expect = 0.37
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +3
Query: 318 AADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDK 497
A Y DAF +I K +GL +F+RG F ++ + F + +K K
Sbjct: 225 ACSPAYNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHV-GIQFPLYEYFKSFLDDFFGK 283
Query: 498 KTQFGV 515
K+ F +
Sbjct: 284 KSNFHI 289
Score = 29.1 bits (62), Expect = 0.65
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 258 VAPIERVKLLLQVQHVSKQIAADQRYK---GIVDAFVRIPKEQGLLSFWRGNFANVIRYF 428
VAP++ VK Q Q + G + + I +G+ +RG ++ Y
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 429 PTQALNFAFKDKYKQVFLGGVDKK 500
P+ ++ F +K K +F GV+KK
Sbjct: 83 PSWSIYFVVYEKCKVLF--GVNKK 104
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 28.7 bits (61), Expect = 0.86
Identities = 22/88 (25%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Frame = +3
Query: 252 DAVAPIERVKLLLQVQHVSK-QIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYF 428
D P + +QV K + A K + D + G + FW G F + + F
Sbjct: 183 DLSTPNSAIISRMQVDRARKGEAALIWAVKSLRDGTIVSADSSGAVKFWNGKFFTLSQSF 242
Query: 429 P---TQALNFAFKDKYKQVFLGGVDKKT 503
AL VF G+D+KT
Sbjct: 243 KLHLADALCLGVSANGDMVFSSGIDRKT 270
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 27.5 bits (58), Expect = 2.0
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -3
Query: 638 HAGHLPYRHRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRS 516
H P R R RD RS +RS R HR DY RS
Sbjct: 140 HQSRSPVRSRDRD---RSSRSSRSRHPSSRSRHRYDDYSRS 177
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 2.6
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +2
Query: 203 RSLRTSWLAVSPPQSPRRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLRPHPQGAGS 382
R L S + PP P +++ A ++AP QQ P Q ++ +PQ
Sbjct: 195 RLLEDSAVKAQPPPPPPQQNYPPAASSSAPPMQYQQT--AYPPQQAPYPPVQAYPQAPQQ 252
Query: 383 PFILAW*LRQRH 418
P ++A +H
Sbjct: 253 PIVVAQPTEHKH 264
>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 963
Score = 25.8 bits (54), Expect = 6.0
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +2
Query: 242 QSPRRRSTNRACQAAAPSTARQQADRRRPALQGYRRRLRPHPQ 370
QS RRR + RA +A+ S++R QA + + R +R HP+
Sbjct: 287 QSKRRRVSARASSSAS-SSSRTQAKSIPSHERTHYRLIRQHPE 328
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 8.0
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 342 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 434
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 25.4 bits (53), Expect = 8.0
Identities = 15/67 (22%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = +3
Query: 234 LRRSLQDAVAPIERVKLLLQVQHVSKQIAA-DQRYKGIVDAFVRIPKEQGLLSFWRGNFA 410
L +L +A ++ V V K + YK D F+ I + G+ +RG
Sbjct: 193 LSSTLSGVIAGAGSKAIMFPVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRGLSV 252
Query: 411 NVIRYFP 431
++++ P
Sbjct: 253 SMLKVAP 259
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.4 bits (53), Expect = 8.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 358 TKASTIPL*RWSAAICLLTCCTWSSSLTRSIGAT 257
T+ + + + WSA I +LT C SLT S+ T
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLT 566
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,737,941
Number of Sequences: 5004
Number of extensions: 54517
Number of successful extensions: 213
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 327172622
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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