Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00659
(706 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 161 4e-42
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 161 4e-42
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.8
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 22 4.9
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 22 4.9
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 6.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 6.5
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 161 bits (392), Expect = 4e-42
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 258 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 437
VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQ
Sbjct: 28 VAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQ 87
Query: 438 ALNFAFKDKYKQVFLGGVDKKTQF 509
ALNFAFKDKYKQVFLGGVDK TQF
Sbjct: 88 ALNFAFKDKYKQVFLGGVDKNTQF 111
Score = 98.3 bits (234), Expect = 6e-23
Identities = 44/65 (67%), Positives = 50/65 (76%)
Frame = +2
Query: 512 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL 691
RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+
Sbjct: 113 RYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172
Query: 692 IGLYR 706
GLYR
Sbjct: 173 TGLYR 177
Score = 50.0 bits (114), Expect = 2e-08
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +1
Query: 178 MSNLADPVAFAKDFLAGGISAAVSKT 255
MS LADPVAFAKDFLAGG++AA+SKT
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKT 26
Score = 27.5 bits (58), Expect = 0.13
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 422
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 25.8 bits (54), Expect = 0.40
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 575 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 688
YP D R R+ G+ + + +C + I+K++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEG 268
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 324 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 461
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 161 bits (392), Expect = 4e-42
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = +3
Query: 258 VAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 437
VAPIERVKLLLQVQH+SKQI+ +QRYKG++D FVRIPKEQG LS+WRGN ANVIRYFPTQ
Sbjct: 28 VAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRGNLANVIRYFPTQ 87
Query: 438 ALNFAFKDKYKQVFLGGVDKKTQF 509
ALNFAFKDKYKQVFLGGVDK TQF
Sbjct: 88 ALNFAFKDKYKQVFLGGVDKNTQF 111
Score = 98.3 bits (234), Expect = 6e-23
Identities = 44/65 (67%), Positives = 50/65 (76%)
Frame = +2
Query: 512 RYFXXXXXXXXXXXXTSLCFVYPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDGL 691
RYF TSLCFVYPLDFARTRLAADVGK G+REF+GLGNC++KIFK+DG+
Sbjct: 113 RYFVGNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGI 172
Query: 692 IGLYR 706
GLYR
Sbjct: 173 TGLYR 177
Score = 50.0 bits (114), Expect = 2e-08
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +1
Query: 178 MSNLADPVAFAKDFLAGGISAAVSKT 255
MS LADPVAFAKDFLAGG++AA+SKT
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKT 26
Score = 27.5 bits (58), Expect = 0.13
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 264 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 422
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
Score = 25.8 bits (54), Expect = 0.40
Identities = 10/38 (26%), Positives = 19/38 (50%)
Frame = +2
Query: 575 YPLDFARTRLAADVGKGDGQREFSGLGNCISKIFKSDG 688
YP D R R+ G+ + + +C + I+K++G
Sbjct: 231 YPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEG 268
Score = 21.4 bits (43), Expect = 8.6
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +3
Query: 324 DQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKD 461
++ + G+ + +I K G+ +RG +V +A F F D
Sbjct: 153 EREFTGLGNCLTKIFKADGITGLYRGFGVSVQGIIIYRAAYFGFYD 198
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/32 (31%), Positives = 13/32 (40%)
Frame = +3
Query: 18 KRHTPTRCAPVITKLLQISWFKNQELVCRDPP 113
K RC L ++ W KN E + D P
Sbjct: 416 KEEANIRCHVAGEPLPRVQWLKNDEALNHDQP 447
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 104 GSPIRVCRNSHLDIFT 151
G P++V +N HL FT
Sbjct: 195 GDPVQVVKNLHLPRFT 210
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 104 GSPIRVCRNSHLDIFT 151
G P++V +N HL FT
Sbjct: 195 GDPVQVVKNLHLPRFT 210
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +3
Query: 180 VEPRRSGRVR*GLPGWRYLRRSLQDAVAPIERVKLLLQV 296
++P +G G+ WR+L + L+D + ++ L V
Sbjct: 55 LDPWFAGSTNIGINKWRFLLQCLEDLDCSLRKLNSRLFV 93
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 36 RCAPVITKLLQISW 77
RCA + ++ LQ+SW
Sbjct: 1119 RCAALTSQSLQVSW 1132
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 36 RCAPVITKLLQISW 77
RCA + ++ LQ+SW
Sbjct: 1115 RCAALTSQSLQVSW 1128
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,302
Number of Sequences: 438
Number of extensions: 4445
Number of successful extensions: 21
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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