Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00654
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08698-1|CAA69957.1| 562|Homo sapiens ranbp3 protein. 59 1e-08
Y08697-1|CAA69956.1| 496|Homo sapiens ranbp3-a protein. 59 1e-08
DQ234346-1|ABB29975.1| 494|Homo sapiens RAN binding protein 3 t... 59 1e-08
AK025300-1|BAB15106.1| 567|Homo sapiens protein ( Homo sapiens ... 59 1e-08
AC004602-2|AAC14485.1| 444|Homo sapiens F23487_2 protein. 59 1e-08
AK222990-1|BAD96710.1| 562|Homo sapiens RAN binding protein 3 i... 57 5e-08
BC047660-1|AAH47660.1| 465|Homo sapiens RAN binding protein 3-l... 48 2e-05
BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1... 32 2.2
BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1... 32 2.2
Y16794-1|CAA76390.2| 456|Homo sapiens type I hair keratin 8 pro... 30 9.0
BC131715-1|AAI31716.1| 456|Homo sapiens keratin 38 protein. 30 9.0
AJ786656-1|CAH10351.1| 439|Homo sapiens hHa8 protein protein. 30 9.0
>Y08698-1|CAA69957.1| 562|Homo sapiens ranbp3 protein.
Length = 562
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQQ-IKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LNTKLW M D+ KS+RIT +D + Q +K+FLI S + QL A+
Sbjct: 440 MRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAAL 499
Query: 179 KARV 190
R+
Sbjct: 500 HHRI 503
>Y08697-1|CAA69956.1| 496|Homo sapiens ranbp3-a protein.
Length = 496
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQQ-IKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LNTKLW M D+ KS+RIT +D + Q +K+FLI S + QL A+
Sbjct: 374 MRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAAL 433
Query: 179 KARV 190
R+
Sbjct: 434 HHRI 437
>DQ234346-1|ABB29975.1| 494|Homo sapiens RAN binding protein 3
transcript variant a protein.
Length = 494
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQQ-IKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LNTKLW M D+ KS+RIT +D + Q +K+FLI S + QL A+
Sbjct: 372 MRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAAL 431
Query: 179 KARV 190
R+
Sbjct: 432 HHRI 435
>AK025300-1|BAB15106.1| 567|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21647 fis, clone COL08457. ).
Length = 567
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQQ-IKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LNTKLW M D+ KS+RIT +D + Q +K+FLI S + QL A+
Sbjct: 445 MRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAAL 504
Query: 179 KARV 190
R+
Sbjct: 505 HHRI 508
>AC004602-2|AAC14485.1| 444|Homo sapiens F23487_2 protein.
Length = 444
Score = 59.3 bits (137), Expect = 1e-08
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQQ-IKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LNTKLW M D+ KS+RIT +D + Q +K+FLI S + QL A+
Sbjct: 322 MRTQGSLRLILNTKLWAQMQIDKASEKSIRITAMDTEDQGVKVFLISASSKDTGQLYAAL 381
Query: 179 KARV 190
R+
Sbjct: 382 HHRI 385
>AK222990-1|BAD96710.1| 562|Homo sapiens RAN binding protein 3
isoform RANBP3-a variant protein.
Length = 562
Score = 57.2 bits (132), Expect = 5e-08
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQQ-IKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LNTKLW M D+ KS+ IT +D + Q +K+FLI S + QL A+
Sbjct: 440 MRTQGSLRLILNTKLWAQMQIDKASEKSIHITAMDTEDQGVKVFLISASSKDTGQLYAAL 499
Query: 179 KARV 190
R+
Sbjct: 500 HHRI 503
>BC047660-1|AAH47660.1| 465|Homo sapiens RAN binding protein 3-like
protein.
Length = 465
Score = 48.4 bits (110), Expect = 2e-05
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +2
Query: 2 VRVAGSLRVVLNTKLWPDMLADQTGPKSLRITELDAQQ-QIKLFLIMGSPAEIVQLTRAI 178
+R GSLR++LN+KLW M + K++RIT D + IK+FLI S + L AI
Sbjct: 343 MRNQGSLRLILNSKLWAQMKIQRANHKNVRITATDLEDYSIKIFLIQASAQDTAYLYAAI 402
Query: 179 KARV 190
R+
Sbjct: 403 HHRL 406
>BC053863-1|AAH53863.1| 709|Homo sapiens YTH domain containing 1
protein.
Length = 709
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 241 AVGRRRLDADADDCGDRLAAAPGAPEYQSNVDGMRDDNETKPLKRKEPVDDETSPKRQCP 420
A R D + + D L P + N + +D NE K KRK + T KRQ P
Sbjct: 3 ADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKP 62
Query: 421 EI 426
+
Sbjct: 63 SV 64
>BC041119-1|AAH41119.1| 727|Homo sapiens YTH domain containing 1
protein.
Length = 727
Score = 31.9 bits (69), Expect = 2.2
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +1
Query: 241 AVGRRRLDADADDCGDRLAAAPGAPEYQSNVDGMRDDNETKPLKRKEPVDDETSPKRQCP 420
A R D + + D L P + N + +D NE K KRK + T KRQ P
Sbjct: 3 ADSREEKDGELNVLDDILTEVPEQDDELYNPESEQDKNEKKGSKRKSDRMESTDTKRQKP 62
Query: 421 EI 426
+
Sbjct: 63 SV 64
>Y16794-1|CAA76390.2| 456|Homo sapiens type I hair keratin 8
protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 3 CAWRARCGSCSTPSCGPTC 59
CA R CG C+T CGPTC
Sbjct: 431 CAPRPSCGPCTT--CGPTC 447
>BC131715-1|AAI31716.1| 456|Homo sapiens keratin 38 protein.
Length = 456
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 3 CAWRARCGSCSTPSCGPTC 59
CA R CG C+T CGPTC
Sbjct: 431 CAPRPSCGPCTT--CGPTC 447
>AJ786656-1|CAH10351.1| 439|Homo sapiens hHa8 protein protein.
Length = 439
Score = 29.9 bits (64), Expect = 9.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3
Query: 3 CAWRARCGSCSTPSCGPTC 59
CA R CG C+T CGPTC
Sbjct: 414 CAPRPSCGPCTT--CGPTC 430
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,393,293
Number of Sequences: 237096
Number of extensions: 1575456
Number of successful extensions: 10378
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 9911
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10370
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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