Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00653
         (354 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...    27   3.8  
L10986-11|AAK93846.2|  203|Caenorhabditis elegans Hypothetical p...    26   6.6  
Z81031-4|CAF31468.2|  421|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z81031-3|CAF31467.1|  455|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z81031-2|CAF31464.1|  429|Caenorhabditis elegans Hypothetical pr...    26   8.7  
Z81031-1|CAB02718.4|  432|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U88184-5|AAK95876.1|  523|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U53339-6|AAA96202.1|  348|Caenorhabditis elegans Serpentine rece...    26   8.7  
AF539814-1|AAN16459.1|  421|Caenorhabditis elegans tyramine rece...    26   8.7  
AF539813-1|AAN16458.1|  444|Caenorhabditis elegans tyramine rece...    26   8.7  

>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
           protein B0365.1 protein.
          Length = 1099

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = -1

Query: 177 IMKIALDLYSCE*ILHYTYLQYIYNPYTLT-VKIH 76
           I K    LY     LH+TYL+   NP+ LT  KIH
Sbjct: 182 IRKFVRSLYEAYKALHFTYLE--INPFVLTNGKIH 214


>L10986-11|AAK93846.2|  203|Caenorhabditis elegans Hypothetical
           protein F10E9.10 protein.
          Length = 203

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -1

Query: 177 IMKIALDLYSCE*ILHYTYLQYIYNPYTLTVKIHSKNPS 61
           +  + L +  C  I  +  LQY Y  Y L ++ H  NPS
Sbjct: 135 LSSVGLPINDCLKIDIFRDLQYFYAFYMLQLRSHFNNPS 173


>Z81031-4|CAF31468.2|  421|Caenorhabditis elegans Hypothetical
           protein C02D4.2f protein.
          Length = 421

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 123 YLQYIYNPYTLTVKIHSKNPSAFT 52
           ++ Y+  P+  T K+H+K   AFT
Sbjct: 352 FVAYVIRPFCETCKLHAKVEQAFT 375


>Z81031-3|CAF31467.1|  455|Caenorhabditis elegans Hypothetical
           protein C02D4.2e protein.
          Length = 455

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 123 YLQYIYNPYTLTVKIHSKNPSAFT 52
           ++ Y+  P+  T K+H+K   AFT
Sbjct: 386 FVAYVIRPFCETCKLHAKVEQAFT 409


>Z81031-2|CAF31464.1|  429|Caenorhabditis elegans Hypothetical
           protein C02D4.2b protein.
          Length = 429

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 123 YLQYIYNPYTLTVKIHSKNPSAFT 52
           ++ Y+  P+  T K+H+K   AFT
Sbjct: 360 FVAYVIRPFCETCKLHAKVEQAFT 383


>Z81031-1|CAB02718.4|  432|Caenorhabditis elegans Hypothetical
           protein C02D4.2a protein.
          Length = 432

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 123 YLQYIYNPYTLTVKIHSKNPSAFT 52
           ++ Y+  P+  T K+H+K   AFT
Sbjct: 363 FVAYVIRPFCETCKLHAKVEQAFT 386


>U88184-5|AAK95876.1|  523|Caenorhabditis elegans Hypothetical
           protein F36H5.11 protein.
          Length = 523

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +2

Query: 185 KHC*ELGLPFYMKIHRFFVKSFIRNIT 265
           KH  EL L    KIH++ +K F R++T
Sbjct: 326 KHIYELILSSIEKIHKYDLKGFYRSLT 352


>U53339-6|AAA96202.1|  348|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 12 protein.
          Length = 348

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -2

Query: 137 YCTTPTYNIYII 102
           YC TPTYN+ I+
Sbjct: 283 YCATPTYNLVIV 294


>AF539814-1|AAN16459.1|  421|Caenorhabditis elegans tyramine
           receptor short isoformSER-2a protein.
          Length = 421

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 123 YLQYIYNPYTLTVKIHSKNPSAFT 52
           ++ Y+  P+  T K+H+K   AFT
Sbjct: 352 FVAYVIRPFCETCKLHAKVEQAFT 375


>AF539813-1|AAN16458.1|  444|Caenorhabditis elegans tyramine
           receptor long isoformSER-2 protein.
          Length = 444

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 123 YLQYIYNPYTLTVKIHSKNPSAFT 52
           ++ Y+  P+  T K+H+K   AFT
Sbjct: 375 FVAYVIRPFCETCKLHAKVEQAFT 398


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,447,405
Number of Sequences: 27780
Number of extensions: 116709
Number of successful extensions: 157
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)