Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00652
         (766 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical p...    58   7e-09
AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical ...    29   2.7  
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p...    29   4.8  
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    29   4.8  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    29   4.8  
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.      29   4.8  
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical pr...    28   6.3  
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr...    28   6.3  

>Z79754-10|CAB02099.1|  181|Caenorhabditis elegans Hypothetical
           protein F25H2.11 protein.
          Length = 181

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
 Frame = +3

Query: 255 VDIVLNHRLVETYAFGDKKSYTLYLKDYMKKLVAKLEEKAPDQ--VEVFKTNMNKVMKDI 428
           +DIVLNH+LVE   + D   +  Y+K +MK ++  +E+   D+  V+ FK  +   +  +
Sbjct: 68  IDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEKNNRDKADVDAFKKKIQGWVVSL 127

Query: 429 LG--RFKELQFFTGESM---DCDGMVAMMEYR 509
           L   RFK L FF GE       +G VA++EYR
Sbjct: 128 LAKDRFKNLAFFIGERAAEGAENGQVAIIEYR 159



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +2

Query: 62  MKIYKDIITGDEMFSDTYKMKLVDEVIYE 148
           M IYKDI T DE+ SD++ MKLVD+++YE
Sbjct: 1   MLIYKDIFTDDELSSDSFPMKLVDDLVYE 29



 Score = 37.5 bits (83), Expect = 0.010
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = +1

Query: 154 GRLVTRAQGDIQIEGFNPSAEEA--DEGTDSAVESGL 258
           G+ V R +G+I + G NPSAEE   D+G+D  VE G+
Sbjct: 32  GKHVVRKEGEIVLAGSNPSAEEGAEDDGSDEHVERGI 68


>AF101316-3|AAC69232.2|  508|Caenorhabditis elegans Hypothetical
           protein F52F10.2 protein.
          Length = 508

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 413 FVHVCFKYFNLVRRLLFQFCY*FFHI 336
           F+++C +Y    RR L  FCY  F I
Sbjct: 137 FIYLCIEYLPTGRRYLMMFCYILFDI 162


>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 306 KKSYTLYLKDYMKKLVAKLEEK 371
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
           protein C02F4.1 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 306 KKSYTLYLKDYMKKLVAKLEEK 371
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
             protein.
          Length = 18519

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 288   TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 452
             T+ FG  D++ Y++ +KD  KKL  +  E+      +  TN  K    + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
             protein.
          Length = 18534

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +3

Query: 288   TYAFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKELQ 452
             T+ FG  D++ Y++ +KD  KKL  +  E+      +  TN  K    + G+ K L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159


>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
          Length = 1781

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +3

Query: 306 KKSYTLYLKDYMKKLVAKLEEK 371
           +K+Y  YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +3

Query: 303 DKKSYTLYLKDYMKKLVAKLEEKAPDQVEVFKTNMNKVMKDILGRFKE 446
           +KK+  L L    +K + K+EEKA       K+ ++K +KD L R K+
Sbjct: 22  EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLKK 64


>U40958-3|ABQ13075.1|  219|Caenorhabditis elegans Hypothetical
           protein F09F9.5 protein.
          Length = 219

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 365 FQFCY*FFHIVFEVQCVGFLVTEGVCF 285
           +Q C+ F H+      +GF    GVCF
Sbjct: 53  YQTCFGFMHVKIATCSIGFFALLGVCF 79


>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical protein
            F37A4.4 protein.
          Length = 1163

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 196  PRSGYHPVLSSPTYRSFVNNFIDQFHFVSVREHLITSDNVLIDLHFDGL 50
            P S +H  +   T  +  N F  +F  ++  E +IT+ +V++    DG+
Sbjct: 936  PVSSFHIYIEDRTDDNVTNEFTTKFQSITSDEAMITTTHVVVKTTEDGI 984


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,652,780
Number of Sequences: 27780
Number of extensions: 339151
Number of successful extensions: 926
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)